Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APLFQ8IW19 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
APLFQ8IW19 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APLFQ8IW19 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APLFQ8IW19 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APLFQ8IW19 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.98■□□□□ 0.63
APLFQ8IW19 AC133681.1-201ENST00000465482 601 ntBASIC18.98■□□□□ 0.63
APLFQ8IW19 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
APLFQ8IW19 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.98■□□□□ 0.63
APLFQ8IW19 AC233702.5-201ENST00000584107 538 ntBASIC18.98■□□□□ 0.63
APLFQ8IW19 MTDHP1-201ENST00000605323 784 ntBASIC18.98■□□□□ 0.63
APLFQ8IW19 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APLFQ8IW19 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
APLFQ8IW19 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
APLFQ8IW19 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APLFQ8IW19 REXO1L12P-201ENST00000622156 912 ntBASIC18.98■□□□□ 0.63
APLFQ8IW19 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APLFQ8IW19 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APLFQ8IW19 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
APLFQ8IW19 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APLFQ8IW19 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
APLFQ8IW19 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APLFQ8IW19 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APLFQ8IW19 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
APLFQ8IW19 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
APLFQ8IW19 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
APLFQ8IW19 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
APLFQ8IW19 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.97■□□□□ 0.63
APLFQ8IW19 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.97■□□□□ 0.63
APLFQ8IW19 PGM5P4-201ENST00000421970 445 ntBASIC18.97■□□□□ 0.63
APLFQ8IW19 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.97■□□□□ 0.63
APLFQ8IW19 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
APLFQ8IW19 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APLFQ8IW19 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
APLFQ8IW19 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
APLFQ8IW19 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
APLFQ8IW19 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
APLFQ8IW19 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.96■□□□□ 0.63
APLFQ8IW19 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.96■□□□□ 0.63
APLFQ8IW19 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 RPS2P55-201ENST00000397318 883 ntBASIC18.96■□□□□ 0.63
APLFQ8IW19 ECEL1P3-201ENST00000427961 737 ntBASIC18.96■□□□□ 0.63
APLFQ8IW19 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.96■□□□□ 0.63
APLFQ8IW19 AC107956.1-201ENST00000494359 873 ntBASIC18.96■□□□□ 0.63
APLFQ8IW19 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.96■□□□□ 0.63
APLFQ8IW19 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.96■□□□□ 0.63
APLFQ8IW19 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.96■□□□□ 0.63
APLFQ8IW19 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
APLFQ8IW19 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APLFQ8IW19 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.96■□□□□ 0.63
APLFQ8IW19 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
APLFQ8IW19 AL133373.2-201ENST00000623187 2828 ntBASIC18.96■□□□□ 0.63
APLFQ8IW19 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
APLFQ8IW19 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APLFQ8IW19 FZD10-202ENST00000539839 3282 ntBASIC18.95■□□□□ 0.62
APLFQ8IW19 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APLFQ8IW19 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APLFQ8IW19 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
APLFQ8IW19 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
APLFQ8IW19 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APLFQ8IW19 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APLFQ8IW19 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.95■□□□□ 0.62
APLFQ8IW19 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.95■□□□□ 0.62
APLFQ8IW19 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.95■□□□□ 0.62
APLFQ8IW19 AP001412.1-201ENST00000608405 714 ntBASIC18.95■□□□□ 0.62
APLFQ8IW19 AC120498.8-201ENST00000614275 531 ntBASIC18.95■□□□□ 0.62
APLFQ8IW19 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms