Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 HLA-A-209ENST00000638375 975 ntBASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 AC239809.2-201ENST00000415381 517 ntBASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.71■□□□□ 0.75
CDKL3Q8IVW4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 ESRRAP1-201ENST00000400596 1257 ntBASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 AL160286.2-201ENST00000567150 934 ntBASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 AC006333.2-201ENST00000607957 2099 ntBASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDKL3Q8IVW4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 KRASP1-201ENST00000407852 552 ntBASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 AL023875.1-201ENST00000640777 796 ntBASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDKL3Q8IVW4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 TSPY21P-201ENST00000433481 731 ntBASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms