Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 FAM21FP-204ENST00000608637 956 ntBASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 AC018695.7-201ENST00000624587 2492 ntBASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CROCCP3Q8IVE0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CROCCP3Q8IVE0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CROCCP3Q8IVE0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.35■□□□□ 0.37
CROCCP3Q8IVE0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CROCCP3Q8IVE0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CROCCP3Q8IVE0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CROCCP3Q8IVE0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CROCCP3Q8IVE0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CROCCP3Q8IVE0 AD000864.1-201ENST00000624076 2295 ntBASIC17.35■□□□□ 0.37
CROCCP3Q8IVE0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CROCCP3Q8IVE0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CROCCP3Q8IVE0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CROCCP3Q8IVE0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CROCCP3Q8IVE0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms