Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 BID-214ENST00000617586 542 ntTSL 5 BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 SDHAP1-207ENST00000440850 2000 ntBASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.06■□□□□ 0.64
NUDCD3Q8IVD9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUDCD3Q8IVD9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 AC104417.2-201ENST00000562989 1793 ntBASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 GPX1P1-201ENST00000388829 606 ntBASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 AC231657.2-201ENST00000624556 255 ntBASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.04■□□□□ 0.64
NUDCD3Q8IVD9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 BICD1-207ENST00000551848 1962 ntBASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms