Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 AC211429.1-201ENST00000415277 523 ntBASIC17.98■□□□□ 0.47
CCDC71Q8IV32 AC012618.2-201ENST00000428058 849 ntBASIC17.98■□□□□ 0.47
CCDC71Q8IV32 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 AC233702.5-201ENST00000584107 538 ntBASIC17.98■□□□□ 0.47
CCDC71Q8IV32 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 AC005332.8-201ENST00000622750 2735 ntBASIC17.98■□□□□ 0.47
CCDC71Q8IV32 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71Q8IV32 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71Q8IV32 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 AC133681.1-201ENST00000465482 601 ntBASIC17.96■□□□□ 0.47
CCDC71Q8IV32 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 AC110285.5-201ENST00000611501 352 ntBASIC17.96■□□□□ 0.47
CCDC71Q8IV32 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71Q8IV32 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.96■□□□□ 0.46
CCDC71Q8IV32 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.96■□□□□ 0.46
CCDC71Q8IV32 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms