Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 AC099778.1-201ENST00000568593 1911 ntBASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 ATP5G2P1-201ENST00000433580 426 ntBASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 SPDYE13P-201ENST00000445314 798 ntBASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.58■□□□□ 0.89
NPAS4Q8IUM7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NPAS4Q8IUM7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.58■□□□□ 0.88
NPAS4Q8IUM7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
NPAS4Q8IUM7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NPAS4Q8IUM7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NPAS4Q8IUM7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NPAS4Q8IUM7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NPAS4Q8IUM7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPAS4Q8IUM7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPAS4Q8IUM7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NPAS4Q8IUM7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.57■□□□□ 0.88
NPAS4Q8IUM7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPAS4Q8IUM7 TPM4P1-201ENST00000436100 807 ntBASIC20.57■□□□□ 0.88
NPAS4Q8IUM7 AC034232.1-201ENST00000506026 1064 ntBASIC20.57■□□□□ 0.88
NPAS4Q8IUM7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.57■□□□□ 0.88
NPAS4Q8IUM7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.57■□□□□ 0.88
NPAS4Q8IUM7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.57■□□□□ 0.88
NPAS4Q8IUM7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPAS4Q8IUM7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPAS4Q8IUM7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
NPAS4Q8IUM7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 HBZP1-201ENST00000354915 429 ntBASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS4Q8IUM7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 RASA4DP-201ENST00000460726 1199 ntBASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS4Q8IUM7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS4Q8IUM7 AC092667.1-201ENST00000434301 2586 ntBASIC20.54■□□□□ 0.88
NPAS4Q8IUM7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS4Q8IUM7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.54■□□□□ 0.88
NPAS4Q8IUM7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS4Q8IUM7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NPAS4Q8IUM7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS4Q8IUM7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.54■□□□□ 0.88
NPAS4Q8IUM7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS4Q8IUM7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.54■□□□□ 0.88
NPAS4Q8IUM7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.54■□□□□ 0.88
NPAS4Q8IUM7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.54■□□□□ 0.88
NPAS4Q8IUM7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS4Q8IUM7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms