Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 SDHAP1-207ENST00000440850 2000 ntBASIC17.67■□□□□ 0.42
ZNF550Q7Z398 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF550Q7Z398 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 AL023875.1-201ENST00000640777 796 ntBASIC17.66■□□□□ 0.42
ZNF550Q7Z398 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF550Q7Z398 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF550Q7Z398 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF550Q7Z398 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 TNXA-203ENST00000507684 2038 ntBASIC17.64■□□□□ 0.41
ZNF550Q7Z398 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 C1QL1P1-201ENST00000568105 661 ntBASIC17.64■□□□□ 0.41
ZNF550Q7Z398 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
ZNF550Q7Z398 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms