Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 AC018470.1-201ENST00000624790 3129 ntBASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 GPX1P1-201ENST00000388829 606 ntBASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 AC090164.3-201ENST00000610780 2143 ntBASIC17.65■□□□□ 0.42
PTCHD4Q6ZW05 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PTCHD4Q6ZW05 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PTCHD4Q6ZW05 AC135050.7-201ENST00000624508 2218 ntBASIC17.64■□□□□ 0.42
PTCHD4Q6ZW05 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 MKRN4P-201ENST00000444706 1521 ntBASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 MIR663A-201ENST00000385250 93 ntBASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 AF201337.1-201ENST00000520239 748 ntBASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 AC105036.2-201ENST00000569468 176 ntBASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 RAP2CP1-201ENST00000605103 478 ntBASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTCHD4Q6ZW05 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 WIZP1-201ENST00000531444 2299 ntBASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms