Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 AC069544.1-201ENST00000609399 999 ntBASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 AC066615.1-201ENST00000640911 628 ntBASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 AL031598.1-201ENST00000561511 1773 ntBASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 SDHAP1-207ENST00000440850 2000 ntBASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 AC142381.4-202ENST00000563973 229 ntBASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 AC120498.8-201ENST00000614275 531 ntBASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR3Q6ZTQ4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 AL158047.1-201ENST00000445918 881 ntBASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 WIZP1-201ENST00000531444 2299 ntBASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR3Q6ZTQ4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 LETM1P2-201ENST00000597330 2178 ntBASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.23■□□□□ 0.67
CDHR3Q6ZTQ4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms