Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.93■□□□□ 0.78
LRRC38Q5VT99 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 AC133681.1-201ENST00000465482 601 ntBASIC19.93■□□□□ 0.78
LRRC38Q5VT99 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC38Q5VT99 RNF165-205ENST00000588679 2904 ntBASIC19.92■□□□□ 0.78
LRRC38Q5VT99 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 ESRRAP1-201ENST00000400596 1257 ntBASIC19.92■□□□□ 0.78
LRRC38Q5VT99 AC239809.2-201ENST00000415381 517 ntBASIC19.92■□□□□ 0.78
LRRC38Q5VT99 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 TSPY23P-201ENST00000440136 739 ntBASIC19.92■□□□□ 0.78
LRRC38Q5VT99 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 AL023875.1-201ENST00000640777 796 ntBASIC19.92■□□□□ 0.78
LRRC38Q5VT99 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC38Q5VT99 KRT8P41-201ENST00000533985 1514 ntBASIC19.92■□□□□ 0.78
LRRC38Q5VT99 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.91■□□□□ 0.78
LRRC38Q5VT99 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 KRASP1-201ENST00000407852 552 ntBASIC19.91■□□□□ 0.78
LRRC38Q5VT99 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 AC083906.6-201ENST00000641366 219 ntBASIC19.91■□□□□ 0.78
LRRC38Q5VT99 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
LRRC38Q5VT99 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC38Q5VT99 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms