Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM27BQ5VT28 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM27BQ5VT28 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM27BQ5VT28 IRX1P1-201ENST00000438849 1838 ntBASIC16.82■□□□□ 0.28
FAM27BQ5VT28 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM27BQ5VT28 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 AL158047.1-201ENST00000445918 881 ntBASIC16.81■□□□□ 0.28
FAM27BQ5VT28 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.81■□□□□ 0.28
FAM27BQ5VT28 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM27BQ5VT28 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 AC026271.3-201ENST00000571884 352 ntBASIC16.8■□□□□ 0.28
FAM27BQ5VT28 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 AL031985.4-201ENST00000642138 673 ntBASIC16.8■□□□□ 0.28
FAM27BQ5VT28 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM27BQ5VT28 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 AC098818.2-201ENST00000564925 2320 ntBASIC16.79■□□□□ 0.28
FAM27BQ5VT28 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 CR392000.1-201ENST00000624770 1228 ntBASIC16.79■□□□□ 0.28
FAM27BQ5VT28 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 TMEM191A-211ENST00000637163 1067 ntBASIC16.79■□□□□ 0.28
FAM27BQ5VT28 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FAM27BQ5VT28 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms