Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 AL390961.4-201ENST00000623958 2535 ntBASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 MIR5787-201ENST00000611784 55 ntBASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 AC092437.1-201ENST00000624794 1048 ntBASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RUNDC3AQ59EK9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 AL121906.2-201ENST00000621597 723 ntBASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RUNDC3AQ59EK9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RUNDC3AQ59EK9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.1■□□□□ 0.49
RUNDC3AQ59EK9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.1■□□□□ 0.49
RUNDC3AQ59EK9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RUNDC3AQ59EK9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
RUNDC3AQ59EK9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RUNDC3AQ59EK9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RUNDC3AQ59EK9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RUNDC3AQ59EK9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RUNDC3AQ59EK9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RUNDC3AQ59EK9 KRT18P16-201ENST00000510337 1294 ntBASIC18.1■□□□□ 0.49
RUNDC3AQ59EK9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RUNDC3AQ59EK9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.1■□□□□ 0.49
RUNDC3AQ59EK9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RUNDC3AQ59EK9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RUNDC3AQ59EK9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 MIR663A-201ENST00000385250 93 ntBASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 AC026185.1-201ENST00000445748 174 ntBASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 AC091874.3-201ENST00000512672 1195 ntBASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms