Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 AP006294.2-201ENST00000641667 209 ntBASIC21.1■□□□□ 0.97
KCNA1Q09470 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.1■□□□□ 0.97
KCNA1Q09470 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.1■□□□□ 0.97
KCNA1Q09470 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KCNA1Q09470 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.1■□□□□ 0.97
KCNA1Q09470 AL161938.1-201ENST00000569833 2180 ntBASIC21.1■□□□□ 0.97
KCNA1Q09470 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.1■□□□□ 0.97
KCNA1Q09470 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KCNA1Q09470 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNA1Q09470 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA1Q09470 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
KCNA1Q09470 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA1Q09470 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA1Q09470 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.09■□□□□ 0.97
KCNA1Q09470 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA1Q09470 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA1Q09470 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA1Q09470 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
KCNA1Q09470 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.09■□□□□ 0.97
KCNA1Q09470 AC091390.4-202ENST00000476426 537 ntBASIC21.09■□□□□ 0.97
KCNA1Q09470 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.09■□□□□ 0.97
KCNA1Q09470 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.09■□□□□ 0.97
KCNA1Q09470 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.09■□□□□ 0.97
KCNA1Q09470 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.09■□□□□ 0.97
KCNA1Q09470 AL031985.4-201ENST00000642138 673 ntBASIC21.09■□□□□ 0.97
KCNA1Q09470 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA1Q09470 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.09■□□□□ 0.97
KCNA1Q09470 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA1Q09470 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA1Q09470 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
KCNA1Q09470 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA1Q09470 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA1Q09470 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA1Q09470 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
KCNA1Q09470 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
KCNA1Q09470 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNA1Q09470 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNA1Q09470 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNA1Q09470 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNA1Q09470 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
KCNA1Q09470 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNA1Q09470 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.08■□□□□ 0.97
KCNA1Q09470 AC093827.2-201ENST00000512654 315 ntBASIC21.08■□□□□ 0.97
KCNA1Q09470 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.08■□□□□ 0.97
KCNA1Q09470 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.08■□□□□ 0.97
KCNA1Q09470 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.08■□□□□ 0.97
KCNA1Q09470 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.08■□□□□ 0.97
KCNA1Q09470 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KCNA1Q09470 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
KCNA1Q09470 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
KCNA1Q09470 AC098818.2-201ENST00000564925 2320 ntBASIC21.07■□□□□ 0.96
KCNA1Q09470 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.07■□□□□ 0.96
KCNA1Q09470 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
KCNA1Q09470 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.07■□□□□ 0.96
KCNA1Q09470 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA1Q09470 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA1Q09470 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.07■□□□□ 0.96
KCNA1Q09470 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA1Q09470 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.07■□□□□ 0.96
KCNA1Q09470 TSPY23P-201ENST00000440136 739 ntBASIC21.07■□□□□ 0.96
KCNA1Q09470 SNORA78-201ENST00000459373 127 ntBASIC21.07■□□□□ 0.96
KCNA1Q09470 B3GAT3P1-201ENST00000471720 806 ntBASIC21.07■□□□□ 0.96
KCNA1Q09470 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.07■□□□□ 0.96
KCNA1Q09470 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA1Q09470 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
KCNA1Q09470 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.07■□□□□ 0.96
KCNA1Q09470 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.07■□□□□ 0.96
KCNA1Q09470 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA1Q09470 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA1Q09470 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
KCNA1Q09470 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA1Q09470 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.07■□□□□ 0.96
KCNA1Q09470 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA1Q09470 AP000974.1-201ENST00000623909 2387 ntBASIC21.07■□□□□ 0.96
KCNA1Q09470 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNA1Q09470 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNA1Q09470 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNA1Q09470 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
KCNA1Q09470 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.06■□□□□ 0.96
KCNA1Q09470 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.06■□□□□ 0.96
KCNA1Q09470 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNA1Q09470 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.06■□□□□ 0.96
KCNA1Q09470 NUDT16P1-203ENST00000513809 620 ntBASIC21.06■□□□□ 0.96
KCNA1Q09470 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.06■□□□□ 0.96
KCNA1Q09470 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.06■□□□□ 0.96
KCNA1Q09470 AC026271.3-201ENST00000571884 352 ntBASIC21.06■□□□□ 0.96
KCNA1Q09470 MIR6786-201ENST00000616843 113 ntBASIC21.06■□□□□ 0.96
KCNA1Q09470 AC130371.2-201ENST00000619443 611 ntBASIC21.06■□□□□ 0.96
KCNA1Q09470 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
KCNA1Q09470 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNA1Q09470 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
KCNA1Q09470 IRX1P1-201ENST00000438849 1838 ntBASIC21.06■□□□□ 0.96
KCNA1Q09470 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNA1Q09470 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KCNA1Q09470 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.06■□□□□ 0.96
KCNA1Q09470 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KCNA1Q09470 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.05■□□□□ 0.96
KCNA1Q09470 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
KCNA1Q09470 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KCNA1Q09470 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms