Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.68■□□□□ 0.58
AP1S2P56377 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
AP1S2P56377 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.68■□□□□ 0.58
AP1S2P56377 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S2P56377 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S2P56377 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.68■□□□□ 0.58
AP1S2P56377 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.68■□□□□ 0.58
AP1S2P56377 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
AP1S2P56377 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.68■□□□□ 0.58
AP1S2P56377 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S2P56377 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.68■□□□□ 0.58
AP1S2P56377 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S2P56377 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S2P56377 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S2P56377 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S2P56377 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.68■□□□□ 0.58
AP1S2P56377 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S2P56377 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
AP1S2P56377 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S2P56377 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
AP1S2P56377 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S2P56377 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S2P56377 AL135905.2-201ENST00000584934 1404 ntBASIC18.67■□□□□ 0.58
AP1S2P56377 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
AP1S2P56377 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S2P56377 AP000974.1-201ENST00000623909 2387 ntBASIC18.67■□□□□ 0.58
AP1S2P56377 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.67■□□□□ 0.58
AP1S2P56377 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.67■□□□□ 0.58
AP1S2P56377 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.67■□□□□ 0.58
AP1S2P56377 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
AP1S2P56377 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S2P56377 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S2P56377 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.67■□□□□ 0.58
AP1S2P56377 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S2P56377 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
AP1S2P56377 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S2P56377 Z85996.1-201ENST00000494644 937 ntBASIC18.67■□□□□ 0.58
AP1S2P56377 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.67■□□□□ 0.58
AP1S2P56377 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.67■□□□□ 0.58
AP1S2P56377 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.67■□□□□ 0.58
AP1S2P56377 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.67■□□□□ 0.58
AP1S2P56377 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.67■□□□□ 0.58
AP1S2P56377 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.67■□□□□ 0.58
AP1S2P56377 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.67■□□□□ 0.58
AP1S2P56377 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.67■□□□□ 0.58
AP1S2P56377 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
AP1S2P56377 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S2P56377 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S2P56377 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S2P56377 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S2P56377 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S2P56377 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S2P56377 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S2P56377 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 FEM1AP3-201ENST00000403722 1741 ntBASIC18.66■□□□□ 0.58
AP1S2P56377 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
AP1S2P56377 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.66■□□□□ 0.58
AP1S2P56377 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.66■□□□□ 0.58
AP1S2P56377 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 KRT8P41-201ENST00000533985 1514 ntBASIC18.66■□□□□ 0.58
AP1S2P56377 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
AP1S2P56377 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 IRX1P1-201ENST00000438849 1838 ntBASIC18.66■□□□□ 0.58
AP1S2P56377 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
AP1S2P56377 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.66■□□□□ 0.58
AP1S2P56377 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
AP1S2P56377 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.66■□□□□ 0.58
AP1S2P56377 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.66■□□□□ 0.58
AP1S2P56377 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
AP1S2P56377 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S2P56377 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S2P56377 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
AP1S2P56377 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S2P56377 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S2P56377 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
AP1S2P56377 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S2P56377 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.65■□□□□ 0.58
AP1S2P56377 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S2P56377 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.65■□□□□ 0.58
AP1S2P56377 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
AP1S2P56377 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S2P56377 AC004980.1-204ENST00000429707 299 ntBASIC18.65■□□□□ 0.58
AP1S2P56377 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.65■□□□□ 0.58
AP1S2P56377 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
AP1S2P56377 AC142381.4-202ENST00000563973 229 ntBASIC18.65■□□□□ 0.58
AP1S2P56377 AC026271.3-201ENST00000571884 352 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms