Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCKAP1LP55160 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1LP55160 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NCKAP1LP55160 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1LP55160 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1LP55160 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1LP55160 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1LP55160 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.03■□□□□ 0.96
NCKAP1LP55160 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.03■□□□□ 0.96
NCKAP1LP55160 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.03■□□□□ 0.96
NCKAP1LP55160 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1LP55160 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.03■□□□□ 0.96
NCKAP1LP55160 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.03■□□□□ 0.96
NCKAP1LP55160 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.03■□□□□ 0.96
NCKAP1LP55160 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1LP55160 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.03■□□□□ 0.96
NCKAP1LP55160 FITM1-202ENST00000559294 800 ntBASIC21.03■□□□□ 0.96
NCKAP1LP55160 SLC25A1P4-201ENST00000567977 778 ntBASIC21.03■□□□□ 0.96
NCKAP1LP55160 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.03■□□□□ 0.96
NCKAP1LP55160 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1LP55160 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.03■□□□□ 0.96
NCKAP1LP55160 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1LP55160 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NCKAP1LP55160 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NCKAP1LP55160 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1LP55160 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1LP55160 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1LP55160 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1LP55160 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1LP55160 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.03■□□□□ 0.96
NCKAP1LP55160 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.03■□□□□ 0.96
NCKAP1LP55160 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1LP55160 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1LP55160 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NCKAP1LP55160 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NCKAP1LP55160 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1LP55160 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1LP55160 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1LP55160 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.02■□□□□ 0.96
NCKAP1LP55160 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.02■□□□□ 0.96
NCKAP1LP55160 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1LP55160 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1LP55160 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1LP55160 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1LP55160 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1LP55160 MFAP1P1-201ENST00000442257 1255 ntBASIC21.02■□□□□ 0.96
NCKAP1LP55160 BX088651.1-201ENST00000540551 451 ntBASIC21.02■□□□□ 0.96
NCKAP1LP55160 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.02■□□□□ 0.96
NCKAP1LP55160 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1LP55160 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1LP55160 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1LP55160 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
NCKAP1LP55160 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1LP55160 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.02■□□□□ 0.96
NCKAP1LP55160 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
NCKAP1LP55160 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.01■□□□□ 0.95
NCKAP1LP55160 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.01■□□□□ 0.95
NCKAP1LP55160 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NCKAP1LP55160 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1LP55160 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NCKAP1LP55160 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1LP55160 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
NCKAP1LP55160 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.01■□□□□ 0.95
NCKAP1LP55160 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.01■□□□□ 0.95
NCKAP1LP55160 AL390955.1-201ENST00000428694 934 ntBASIC21.01■□□□□ 0.95
NCKAP1LP55160 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.01■□□□□ 0.95
NCKAP1LP55160 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1LP55160 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1LP55160 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1LP55160 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1LP55160 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1LP55160 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.01■□□□□ 0.95
NCKAP1LP55160 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1LP55160 IRX1P1-201ENST00000438849 1838 ntBASIC21.01■□□□□ 0.95
NCKAP1LP55160 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.01■□□□□ 0.95
NCKAP1LP55160 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1LP55160 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1LP55160 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1LP55160 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.01■□□□□ 0.95
NCKAP1LP55160 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1LP55160 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NCKAP1LP55160 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NCKAP1LP55160 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCKAP1LP55160 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21■□□□□ 0.95
NCKAP1LP55160 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NCKAP1LP55160 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21■□□□□ 0.95
NCKAP1LP55160 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21■□□□□ 0.95
NCKAP1LP55160 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
NCKAP1LP55160 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21■□□□□ 0.95
NCKAP1LP55160 CRYGFP-201ENST00000418459 633 ntBASIC21■□□□□ 0.95
NCKAP1LP55160 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCKAP1LP55160 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCKAP1LP55160 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCKAP1LP55160 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
NCKAP1LP55160 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCKAP1LP55160 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21■□□□□ 0.95
NCKAP1LP55160 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCKAP1LP55160 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms