Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA4P43681 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.37■□□□□ 0.69
CHRNA4P43681 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.37■□□□□ 0.69
CHRNA4P43681 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA4P43681 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.37■□□□□ 0.69
CHRNA4P43681 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.36■□□□□ 0.69
CHRNA4P43681 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA4P43681 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHRNA4P43681 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA4P43681 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA4P43681 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
CHRNA4P43681 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA4P43681 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHRNA4P43681 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHRNA4P43681 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA4P43681 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA4P43681 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHRNA4P43681 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA4P43681 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA4P43681 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA4P43681 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA4P43681 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA4P43681 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA4P43681 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.36■□□□□ 0.69
CHRNA4P43681 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA4P43681 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.36■□□□□ 0.69
CHRNA4P43681 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.36■□□□□ 0.69
CHRNA4P43681 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA4P43681 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.36■□□□□ 0.69
CHRNA4P43681 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.36■□□□□ 0.69
CHRNA4P43681 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA4P43681 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA4P43681 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHRNA4P43681 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA4P43681 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CHRNA4P43681 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA4P43681 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA4P43681 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA4P43681 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHRNA4P43681 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA4P43681 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNA4P43681 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA4P43681 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNA4P43681 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA4P43681 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.35■□□□□ 0.69
CHRNA4P43681 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA4P43681 IRX1P1-201ENST00000438849 1838 ntBASIC19.35■□□□□ 0.69
CHRNA4P43681 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CHRNA4P43681 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA4P43681 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNA4P43681 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA4P43681 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA4P43681 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA4P43681 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNA4P43681 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNA4P43681 CR392000.1-201ENST00000624770 1228 ntBASIC19.35■□□□□ 0.69
CHRNA4P43681 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA4P43681 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNA4P43681 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA4P43681 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA4P43681 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA4P43681 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA4P43681 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CHRNA4P43681 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA4P43681 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA4P43681 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA4P43681 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.34■□□□□ 0.69
CHRNA4P43681 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA4P43681 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA4P43681 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA4P43681 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA4P43681 AL353807.1-201ENST00000427475 662 ntBASIC19.34■□□□□ 0.69
CHRNA4P43681 KSR1P1-201ENST00000446298 240 ntBASIC19.34■□□□□ 0.69
CHRNA4P43681 UBE2SP1-201ENST00000450587 669 ntBASIC19.34■□□□□ 0.69
CHRNA4P43681 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA4P43681 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA4P43681 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.34■□□□□ 0.69
CHRNA4P43681 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA4P43681 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA4P43681 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.34■□□□□ 0.69
CHRNA4P43681 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.34■□□□□ 0.69
CHRNA4P43681 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CHRNA4P43681 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.34■□□□□ 0.69
CHRNA4P43681 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
CHRNA4P43681 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.34■□□□□ 0.69
CHRNA4P43681 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA4P43681 BX323043.1-201ENST00000641006 1765 ntBASIC19.34■□□□□ 0.69
CHRNA4P43681 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA4P43681 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA4P43681 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA4P43681 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA4P43681 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA4P43681 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA4P43681 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.33■□□□□ 0.69
CHRNA4P43681 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA4P43681 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA4P43681 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA4P43681 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA4P43681 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA4P43681 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms