Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.65■■□□□ 1.06
CIITAP33076 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CIITAP33076 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.65■■□□□ 1.06
CIITAP33076 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.65■■□□□ 1.06
CIITAP33076 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.65■■□□□ 1.06
CIITAP33076 EGLN1P1-201ENST00000531623 762 ntBASIC21.65■■□□□ 1.06
CIITAP33076 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CIITAP33076 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CIITAP33076 AC145285.6-201ENST00000604632 637 ntBASIC21.65■■□□□ 1.06
CIITAP33076 AC133561.5-201ENST00000635547 218 ntBASIC21.65■■□□□ 1.06
CIITAP33076 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.65■■□□□ 1.06
CIITAP33076 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CIITAP33076 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.65■■□□□ 1.06
CIITAP33076 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CIITAP33076 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CIITAP33076 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CIITAP33076 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CIITAP33076 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CIITAP33076 AC141586.3-201ENST00000562166 1838 ntBASIC21.64■■□□□ 1.06
CIITAP33076 AL032819.2-201ENST00000624543 2162 ntBASIC21.64■■□□□ 1.06
CIITAP33076 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CIITAP33076 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.64■■□□□ 1.05
CIITAP33076 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CIITAP33076 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CIITAP33076 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CIITAP33076 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.64■■□□□ 1.05
CIITAP33076 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CIITAP33076 C2orf69P3-201ENST00000565542 1120 ntBASIC21.64■■□□□ 1.05
CIITAP33076 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.64■■□□□ 1.05
CIITAP33076 AL023803.3-201ENST00000615559 522 ntBASIC21.64■■□□□ 1.05
CIITAP33076 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CIITAP33076 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CIITAP33076 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.64■■□□□ 1.05
CIITAP33076 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
CIITAP33076 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CIITAP33076 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CIITAP33076 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CIITAP33076 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CIITAP33076 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CIITAP33076 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.63■■□□□ 1.05
CIITAP33076 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CIITAP33076 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CIITAP33076 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CIITAP33076 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CIITAP33076 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CIITAP33076 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.63■■□□□ 1.05
CIITAP33076 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.63■■□□□ 1.05
CIITAP33076 SLC25A1P2-201ENST00000430693 912 ntBASIC21.63■■□□□ 1.05
CIITAP33076 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CIITAP33076 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.63■■□□□ 1.05
CIITAP33076 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.63■■□□□ 1.05
CIITAP33076 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.63■■□□□ 1.05
CIITAP33076 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CIITAP33076 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.63■■□□□ 1.05
CIITAP33076 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.63■■□□□ 1.05
CIITAP33076 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CIITAP33076 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CIITAP33076 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CIITAP33076 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.63■■□□□ 1.05
CIITAP33076 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CIITAP33076 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CIITAP33076 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.63■■□□□ 1.05
CIITAP33076 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CIITAP33076 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.62■■□□□ 1.05
CIITAP33076 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.62■■□□□ 1.05
CIITAP33076 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
CIITAP33076 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CIITAP33076 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.62■■□□□ 1.05
CIITAP33076 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.62■■□□□ 1.05
CIITAP33076 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CIITAP33076 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CIITAP33076 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.62■■□□□ 1.05
CIITAP33076 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CIITAP33076 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CIITAP33076 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
CIITAP33076 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CIITAP33076 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CIITAP33076 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CIITAP33076 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CIITAP33076 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
CIITAP33076 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.62■■□□□ 1.05
CIITAP33076 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CIITAP33076 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CIITAP33076 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CIITAP33076 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CIITAP33076 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CIITAP33076 AC007952.6-201ENST00000573168 2673 ntBASIC21.61■■□□□ 1.05
CIITAP33076 AC003957.1-201ENST00000625108 2673 ntBASIC21.61■■□□□ 1.05
CIITAP33076 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CIITAP33076 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CIITAP33076 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
CIITAP33076 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CIITAP33076 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CIITAP33076 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CIITAP33076 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.61■■□□□ 1.05
CIITAP33076 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.61■■□□□ 1.05
CIITAP33076 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.61■■□□□ 1.05
CIITAP33076 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.61■■□□□ 1.05
CIITAP33076 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.61■■□□□ 1.05
CIITAP33076 LINC01023-201ENST00000606054 436 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms