Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A4P31645 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A4P31645 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A4P31645 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A4P31645 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SLC6A4P31645 PRSS44-201ENST00000515154 1146 ntBASIC19.72■□□□□ 0.75
SLC6A4P31645 KRT18P21-201ENST00000515767 1272 ntBASIC19.72■□□□□ 0.75
SLC6A4P31645 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC6A4P31645 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SLC6A4P31645 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SLC6A4P31645 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC6A4P31645 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC6A4P31645 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC6A4P31645 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A4P31645 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC6A4P31645 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC6A4P31645 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC6A4P31645 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SLC6A4P31645 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC6A4P31645 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC6A4P31645 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SLC6A4P31645 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC6A4P31645 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SLC6A4P31645 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
SLC6A4P31645 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.71■□□□□ 0.75
SLC6A4P31645 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SLC6A4P31645 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC6A4P31645 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC6A4P31645 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A4P31645 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SLC6A4P31645 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC6A4P31645 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A4P31645 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A4P31645 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A4P31645 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A4P31645 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A4P31645 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A4P31645 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A4P31645 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SLC6A4P31645 FAM210CP-201ENST00000445714 574 ntBASIC19.7■□□□□ 0.74
SLC6A4P31645 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC6A4P31645 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.7■□□□□ 0.74
SLC6A4P31645 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A4P31645 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.7■□□□□ 0.74
SLC6A4P31645 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A4P31645 FAM87A-204ENST00000613235 858 ntBASIC19.7■□□□□ 0.74
SLC6A4P31645 AL023803.3-201ENST00000615559 522 ntBASIC19.7■□□□□ 0.74
SLC6A4P31645 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SLC6A4P31645 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SLC6A4P31645 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SLC6A4P31645 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SLC6A4P31645 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A4P31645 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A4P31645 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SLC6A4P31645 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A4P31645 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.69■□□□□ 0.74
SLC6A4P31645 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC6A4P31645 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A4P31645 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC6A4P31645 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC6A4P31645 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A4P31645 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A4P31645 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC6A4P31645 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A4P31645 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A4P31645 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A4P31645 SLC25A1P2-201ENST00000430693 912 ntBASIC19.69■□□□□ 0.74
SLC6A4P31645 TSPY21P-201ENST00000433481 731 ntBASIC19.69■□□□□ 0.74
SLC6A4P31645 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC6A4P31645 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.69■□□□□ 0.74
SLC6A4P31645 SLC25A3P1-201ENST00000443844 931 ntBASIC19.69■□□□□ 0.74
SLC6A4P31645 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC6A4P31645 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.69■□□□□ 0.74
SLC6A4P31645 AC005363.2-201ENST00000618631 242 ntBASIC19.69■□□□□ 0.74
SLC6A4P31645 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC6A4P31645 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SLC6A4P31645 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A4P31645 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
SLC6A4P31645 AC007952.6-201ENST00000573168 2673 ntBASIC19.68■□□□□ 0.74
SLC6A4P31645 AC003957.1-201ENST00000625108 2673 ntBASIC19.68■□□□□ 0.74
SLC6A4P31645 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC6A4P31645 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms