Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
COL8A2P25067 AC092865.7-201ENST00000641832 219 ntBASIC16.21■□□□□ 0.19
COL8A2P25067 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.21■□□□□ 0.19
COL8A2P25067 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL8A2P25067 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL8A2P25067 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.21■□□□□ 0.19
COL8A2P25067 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL8A2P25067 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.21■□□□□ 0.19
COL8A2P25067 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.21■□□□□ 0.18
COL8A2P25067 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
COL8A2P25067 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.21■□□□□ 0.18
COL8A2P25067 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
COL8A2P25067 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
COL8A2P25067 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.2■□□□□ 0.18
COL8A2P25067 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
COL8A2P25067 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
COL8A2P25067 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
COL8A2P25067 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.2■□□□□ 0.18
COL8A2P25067 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.2■□□□□ 0.18
COL8A2P25067 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
COL8A2P25067 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.2■□□□□ 0.18
COL8A2P25067 KRT18P57-201ENST00000443599 1254 ntBASIC16.2■□□□□ 0.18
COL8A2P25067 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.2■□□□□ 0.18
COL8A2P25067 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.2■□□□□ 0.18
COL8A2P25067 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
COL8A2P25067 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.2■□□□□ 0.18
COL8A2P25067 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.2■□□□□ 0.18
COL8A2P25067 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
COL8A2P25067 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL8A2P25067 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.19■□□□□ 0.18
COL8A2P25067 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
COL8A2P25067 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COL8A2P25067 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.19■□□□□ 0.18
COL8A2P25067 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.19■□□□□ 0.18
COL8A2P25067 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.19■□□□□ 0.18
COL8A2P25067 AC104417.2-201ENST00000562989 1793 ntBASIC16.19■□□□□ 0.18
COL8A2P25067 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.19■□□□□ 0.18
COL8A2P25067 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.19■□□□□ 0.18
COL8A2P25067 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.19■□□□□ 0.18
COL8A2P25067 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COL8A2P25067 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COL8A2P25067 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 TERF1P1-201ENST00000311003 1181 ntBASIC16.19■□□□□ 0.18
COL8A2P25067 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
COL8A2P25067 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.19■□□□□ 0.18
COL8A2P25067 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.19■□□□□ 0.18
COL8A2P25067 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COL8A2P25067 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.19■□□□□ 0.18
COL8A2P25067 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COL8A2P25067 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.19■□□□□ 0.18
COL8A2P25067 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL8A2P25067 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.19■□□□□ 0.18
COL8A2P25067 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL8A2P25067 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL8A2P25067 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL8A2P25067 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL8A2P25067 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL8A2P25067 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL8A2P25067 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL8A2P25067 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL8A2P25067 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL8A2P25067 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL8A2P25067 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL8A2P25067 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.18■□□□□ 0.18
COL8A2P25067 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.18■□□□□ 0.18
COL8A2P25067 LIN28AP1-201ENST00000429574 405 ntBASIC16.18■□□□□ 0.18
COL8A2P25067 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms