Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP24386 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP24386 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP24386 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP24386 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
CHMP24386 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.93■□□□□ 0.46
CHMP24386 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP24386 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP24386 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP24386 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP24386 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP24386 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP24386 AC239809.2-201ENST00000415381 517 ntBASIC17.93■□□□□ 0.46
CHMP24386 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.93■□□□□ 0.46
CHMP24386 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP24386 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CHMP24386 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.93■□□□□ 0.46
CHMP24386 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.93■□□□□ 0.46
CHMP24386 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.93■□□□□ 0.46
CHMP24386 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.93■□□□□ 0.46
CHMP24386 AL023875.1-201ENST00000640777 796 ntBASIC17.93■□□□□ 0.46
CHMP24386 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP24386 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP24386 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CHMP24386 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP24386 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP24386 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP24386 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.92■□□□□ 0.46
CHMP24386 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP24386 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP24386 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHMP24386 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.92■□□□□ 0.46
CHMP24386 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.92■□□□□ 0.46
CHMP24386 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.92■□□□□ 0.46
CHMP24386 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.92■□□□□ 0.46
CHMP24386 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHMP24386 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.92■□□□□ 0.46
CHMP24386 AC124016.1-201ENST00000609552 612 ntBASIC17.92■□□□□ 0.46
CHMP24386 AC124283.5-201ENST00000624661 1809 ntBASIC17.92■□□□□ 0.46
CHMP24386 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHMP24386 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP24386 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP24386 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP24386 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP24386 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP24386 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP24386 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP24386 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP24386 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP24386 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.91■□□□□ 0.46
CHMP24386 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP24386 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP24386 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.91■□□□□ 0.46
CHMP24386 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP24386 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP24386 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CHMP24386 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP24386 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP24386 AC110285.5-201ENST00000611501 352 ntBASIC17.91■□□□□ 0.46
CHMP24386 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CHMP24386 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP24386 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP24386 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHMP24386 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP24386 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP24386 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP24386 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP24386 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP24386 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHMP24386 CROCCP3-202ENST00000420820 1947 ntBASIC17.9■□□□□ 0.46
CHMP24386 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP24386 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CHMP24386 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP24386 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CHMP24386 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP24386 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP24386 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP24386 MIR718-201ENST00000390190 70 ntBASIC17.9■□□□□ 0.46
CHMP24386 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP24386 KRASP1-201ENST00000407852 552 ntBASIC17.9■□□□□ 0.46
CHMP24386 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.9■□□□□ 0.46
CHMP24386 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP24386 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP24386 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP24386 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
CHMP24386 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP24386 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP24386 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP24386 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP24386 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP24386 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP24386 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP24386 PHGDH-210ENST00000641115 1638 ntBASIC17.9■□□□□ 0.46
CHMP24386 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.9■□□□□ 0.46
CHMP24386 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CHMP24386 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP24386 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP24386 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHMP24386 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.89■□□□□ 0.46
CHMP24386 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms