Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
XPAP23025 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.37■□□□□ 0.69
XPAP23025 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
XPAP23025 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.37■□□□□ 0.69
XPAP23025 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.37■□□□□ 0.69
XPAP23025 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
XPAP23025 ZNF815P-204ENST00000434898 1737 ntBASIC19.37■□□□□ 0.69
XPAP23025 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
XPAP23025 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.37■□□□□ 0.69
XPAP23025 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.37■□□□□ 0.69
XPAP23025 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
XPAP23025 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
XPAP23025 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
XPAP23025 MESTP1-201ENST00000404287 994 ntBASIC19.37■□□□□ 0.69
XPAP23025 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 AL390955.1-201ENST00000428694 934 ntBASIC19.37■□□□□ 0.69
XPAP23025 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.37■□□□□ 0.69
XPAP23025 Z85996.1-201ENST00000494644 937 ntBASIC19.37■□□□□ 0.69
XPAP23025 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.37■□□□□ 0.69
XPAP23025 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.37■□□□□ 0.69
XPAP23025 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
XPAP23025 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
XPAP23025 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
XPAP23025 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.36■□□□□ 0.69
XPAP23025 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.36■□□□□ 0.69
XPAP23025 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XPAP23025 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
XPAP23025 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XPAP23025 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
XPAP23025 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XPAP23025 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
XPAP23025 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
XPAP23025 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XPAP23025 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
XPAP23025 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XPAP23025 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
XPAP23025 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
XPAP23025 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
XPAP23025 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.36■□□□□ 0.69
XPAP23025 AC091390.4-202ENST00000476426 537 ntBASIC19.36■□□□□ 0.69
XPAP23025 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.36■□□□□ 0.69
XPAP23025 LINC01023-201ENST00000606054 436 ntBASIC19.36■□□□□ 0.69
XPAP23025 AP000692.2-201ENST00000608391 879 ntBASIC19.36■□□□□ 0.69
XPAP23025 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.36■□□□□ 0.69
XPAP23025 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XPAP23025 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
XPAP23025 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.35■□□□□ 0.69
XPAP23025 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.35■□□□□ 0.69
XPAP23025 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.35■□□□□ 0.69
XPAP23025 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.35■□□□□ 0.69
XPAP23025 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
XPAP23025 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
XPAP23025 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
XPAP23025 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XPAP23025 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
XPAP23025 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.35■□□□□ 0.69
XPAP23025 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XPAP23025 AC211429.1-201ENST00000415277 523 ntBASIC19.35■□□□□ 0.69
XPAP23025 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XPAP23025 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.35■□□□□ 0.69
XPAP23025 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.35■□□□□ 0.69
XPAP23025 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.35■□□□□ 0.69
XPAP23025 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.35■□□□□ 0.69
XPAP23025 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.35■□□□□ 0.69
XPAP23025 FITM1-202ENST00000559294 800 ntBASIC19.35■□□□□ 0.69
XPAP23025 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.35■□□□□ 0.69
XPAP23025 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.35■□□□□ 0.69
XPAP23025 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XPAP23025 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
XPAP23025 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.35■□□□□ 0.69
XPAP23025 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
XPAP23025 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XPAP23025 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.35■□□□□ 0.69
XPAP23025 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XPAP23025 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
XPAP23025 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XPAP23025 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
XPAP23025 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
XPAP23025 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
XPAP23025 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
XPAP23025 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms