Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AC010980.2-201ENST00000587099 1412 ntBASIC17.78■□□□□ 0.44
NR4A1P22736 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NR4A1P22736 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NR4A1P22736 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NR4A1P22736 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NR4A1P22736 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.78■□□□□ 0.44
NR4A1P22736 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NR4A1P22736 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.78■□□□□ 0.44
NR4A1P22736 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NR4A1P22736 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR4A1P22736 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.77■□□□□ 0.44
NR4A1P22736 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR4A1P22736 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
NR4A1P22736 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR4A1P22736 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NR4A1P22736 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
NR4A1P22736 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.77■□□□□ 0.44
NR4A1P22736 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.77■□□□□ 0.44
NR4A1P22736 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.77■□□□□ 0.44
NR4A1P22736 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR4A1P22736 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NR4A1P22736 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
NR4A1P22736 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NR4A1P22736 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.77■□□□□ 0.44
NR4A1P22736 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.77■□□□□ 0.44
NR4A1P22736 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.77■□□□□ 0.44
NR4A1P22736 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.77■□□□□ 0.44
NR4A1P22736 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.77■□□□□ 0.44
NR4A1P22736 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NR4A1P22736 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
NR4A1P22736 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NR4A1P22736 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NR4A1P22736 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.77■□□□□ 0.43
NR4A1P22736 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
NR4A1P22736 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR4A1P22736 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR4A1P22736 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR4A1P22736 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NR4A1P22736 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR4A1P22736 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR4A1P22736 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR4A1P22736 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
NR4A1P22736 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NR4A1P22736 AL355802.2-201ENST00000402069 882 ntBASIC17.76■□□□□ 0.43
NR4A1P22736 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.76■□□□□ 0.43
NR4A1P22736 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.76■□□□□ 0.43
NR4A1P22736 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.76■□□□□ 0.43
NR4A1P22736 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.76■□□□□ 0.43
NR4A1P22736 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.76■□□□□ 0.43
NR4A1P22736 AC142086.2-201ENST00000569753 217 ntBASIC17.76■□□□□ 0.43
NR4A1P22736 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.76■□□□□ 0.43
NR4A1P22736 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR4A1P22736 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.76■□□□□ 0.43
NR4A1P22736 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.76■□□□□ 0.43
NR4A1P22736 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR4A1P22736 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NR4A1P22736 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.76■□□□□ 0.43
NR4A1P22736 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
NR4A1P22736 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR4A1P22736 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR4A1P22736 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NR4A1P22736 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NR4A1P22736 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.75■□□□□ 0.43
NR4A1P22736 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.75■□□□□ 0.43
NR4A1P22736 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NR4A1P22736 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.75■□□□□ 0.43
NR4A1P22736 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 AC139713.2-201ENST00000641328 2723 ntBASIC17.75■□□□□ 0.43
NR4A1P22736 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
NR4A1P22736 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.75■□□□□ 0.43
NR4A1P22736 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NR4A1P22736 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.75■□□□□ 0.43
NR4A1P22736 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
NR4A1P22736 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.75■□□□□ 0.43
NR4A1P22736 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.75■□□□□ 0.43
NR4A1P22736 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.75■□□□□ 0.43
NR4A1P22736 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.75■□□□□ 0.43
NR4A1P22736 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.75■□□□□ 0.43
NR4A1P22736 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.75■□□□□ 0.43
NR4A1P22736 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.75■□□□□ 0.43
NR4A1P22736 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.75■□□□□ 0.43
NR4A1P22736 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NR4A1P22736 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NR4A1P22736 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NR4A1P22736 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms