Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH3P22223 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH3P22223 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH3P22223 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH3P22223 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH3P22223 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH3P22223 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH3P22223 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH3P22223 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH3P22223 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH3P22223 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH3P22223 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDH3P22223 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH3P22223 KRT8P8-201ENST00000434750 1448 ntBASIC18.77■□□□□ 0.6
CDH3P22223 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH3P22223 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.77■□□□□ 0.6
CDH3P22223 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CDH3P22223 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.77■□□□□ 0.6
CDH3P22223 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH3P22223 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.77■□□□□ 0.6
CDH3P22223 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDH3P22223 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CDH3P22223 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH3P22223 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH3P22223 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH3P22223 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH3P22223 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.77■□□□□ 0.59
CDH3P22223 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.77■□□□□ 0.59
CDH3P22223 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CDH3P22223 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH3P22223 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.76■□□□□ 0.59
CDH3P22223 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.76■□□□□ 0.59
CDH3P22223 BX088651.1-201ENST00000540551 451 ntBASIC18.76■□□□□ 0.59
CDH3P22223 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH3P22223 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH3P22223 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH3P22223 AL445675.2-201ENST00000620291 557 ntBASIC18.76■□□□□ 0.59
CDH3P22223 AL031985.4-201ENST00000642138 673 ntBASIC18.76■□□□□ 0.59
CDH3P22223 AC004408.2-201ENST00000623613 2777 ntBASIC18.76■□□□□ 0.59
CDH3P22223 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDH3P22223 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH3P22223 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH3P22223 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH3P22223 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH3P22223 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH3P22223 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH3P22223 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH3P22223 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CDH3P22223 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH3P22223 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH3P22223 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH3P22223 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH3P22223 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH3P22223 TNXA-203ENST00000507684 2038 ntBASIC18.75■□□□□ 0.59
CDH3P22223 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH3P22223 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH3P22223 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH3P22223 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH3P22223 TSPY15P-201ENST00000457163 923 ntBASIC18.75■□□□□ 0.59
CDH3P22223 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.75■□□□□ 0.59
CDH3P22223 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH3P22223 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CDH3P22223 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.75■□□□□ 0.59
CDH3P22223 REXO1L12P-201ENST00000622156 912 ntBASIC18.75■□□□□ 0.59
CDH3P22223 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH3P22223 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH3P22223 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CDH3P22223 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH3P22223 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH3P22223 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
CDH3P22223 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH3P22223 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH3P22223 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDH3P22223 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH3P22223 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH3P22223 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH3P22223 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH3P22223 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CDH3P22223 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDH3P22223 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH3P22223 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH3P22223 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDH3P22223 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH3P22223 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms