Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 AF186192.3-201ENST00000583427 947 ntBASIC19.38■□□□□ 0.69
HLA-DPA1P20036 AL135905.2-201ENST00000584934 1404 ntBASIC19.38■□□□□ 0.69
HLA-DPA1P20036 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 AC131212.4-201ENST00000623606 975 ntBASIC19.37■□□□□ 0.69
HLA-DPA1P20036 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPA1P20036 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 AC004980.1-204ENST00000429707 299 ntBASIC19.36■□□□□ 0.69
HLA-DPA1P20036 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 TSPY21P-201ENST00000433481 731 ntBASIC19.36■□□□□ 0.69
HLA-DPA1P20036 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 RPS2P4-201ENST00000476944 856 ntBASIC19.36■□□□□ 0.69
HLA-DPA1P20036 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 AC073195.1-201ENST00000607241 877 ntBASIC19.36■□□□□ 0.69
HLA-DPA1P20036 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
HLA-DPA1P20036 KRT16P1-201ENST00000399124 1418 ntBASIC19.35■□□□□ 0.69
HLA-DPA1P20036 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.35■□□□□ 0.69
HLA-DPA1P20036 Z85996.1-201ENST00000494644 937 ntBASIC19.35■□□□□ 0.69
HLA-DPA1P20036 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms