Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.33■□□□□ 0.84
PTPN1P18031 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN1P18031 LINC01568-207ENST00000641790 1380 ntBASIC20.33■□□□□ 0.84
PTPN1P18031 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN1P18031 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN1P18031 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PTPN1P18031 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN1P18031 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN1P18031 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.32■□□□□ 0.84
PTPN1P18031 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN1P18031 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN1P18031 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
PTPN1P18031 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
PTPN1P18031 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN1P18031 TSPY21P-201ENST00000433481 731 ntBASIC20.32■□□□□ 0.84
PTPN1P18031 TSPY23P-201ENST00000440136 739 ntBASIC20.32■□□□□ 0.84
PTPN1P18031 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN1P18031 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PTPN1P18031 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN1P18031 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN1P18031 AC145285.6-201ENST00000604632 637 ntBASIC20.32■□□□□ 0.84
PTPN1P18031 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.32■□□□□ 0.84
PTPN1P18031 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN1P18031 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN1P18031 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN1P18031 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PTPN1P18031 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN1P18031 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.32■□□□□ 0.84
PTPN1P18031 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN1P18031 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN1P18031 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN1P18031 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN1P18031 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN1P18031 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN1P18031 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
PTPN1P18031 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN1P18031 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN1P18031 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN1P18031 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN1P18031 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN1P18031 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN1P18031 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN1P18031 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.31■□□□□ 0.84
PTPN1P18031 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN1P18031 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
PTPN1P18031 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN1P18031 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN1P18031 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN1P18031 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN1P18031 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN1P18031 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN1P18031 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN1P18031 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN1P18031 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN1P18031 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN1P18031 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN1P18031 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PTPN1P18031 AC007952.6-201ENST00000573168 2673 ntBASIC20.3■□□□□ 0.84
PTPN1P18031 AC003957.1-201ENST00000625108 2673 ntBASIC20.3■□□□□ 0.84
PTPN1P18031 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN1P18031 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN1P18031 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN1P18031 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.3■□□□□ 0.84
PTPN1P18031 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN1P18031 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PTPN1P18031 TSPY14P-201ENST00000303979 915 ntBASIC20.3■□□□□ 0.84
PTPN1P18031 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN1P18031 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN1P18031 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN1P18031 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.3■□□□□ 0.84
PTPN1P18031 EGLN1P1-201ENST00000531623 762 ntBASIC20.3■□□□□ 0.84
PTPN1P18031 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.3■□□□□ 0.84
PTPN1P18031 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.3■□□□□ 0.84
PTPN1P18031 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PTPN1P18031 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.3■□□□□ 0.84
PTPN1P18031 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN1P18031 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN1P18031 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN1P18031 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PTPN1P18031 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN1P18031 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.3■□□□□ 0.84
PTPN1P18031 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN1P18031 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
PTPN1P18031 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN1P18031 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.3■□□□□ 0.84
PTPN1P18031 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PTPN1P18031 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PTPN1P18031 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PTPN1P18031 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.3■□□□□ 0.84
PTPN1P18031 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN1P18031 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.29■□□□□ 0.84
PTPN1P18031 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PTPN1P18031 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN1P18031 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN1P18031 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.29■□□□□ 0.84
PTPN1P18031 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.29■□□□□ 0.84
PTPN1P18031 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN1P18031 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.29■□□□□ 0.84
PTPN1P18031 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN1P18031 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms