Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB2P17787 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CHRNB2P17787 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB2P17787 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB2P17787 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CHRNB2P17787 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.37■□□□□ 0.85
CHRNB2P17787 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.37■□□□□ 0.85
CHRNB2P17787 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNB2P17787 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNB2P17787 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNB2P17787 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNB2P17787 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNB2P17787 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CHRNB2P17787 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNB2P17787 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNB2P17787 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNB2P17787 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNB2P17787 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.36■□□□□ 0.85
CHRNB2P17787 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNB2P17787 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNB2P17787 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNB2P17787 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNB2P17787 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.36■□□□□ 0.85
CHRNB2P17787 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.36■□□□□ 0.85
CHRNB2P17787 C1QBPP2-201ENST00000528754 825 ntBASIC20.36■□□□□ 0.85
CHRNB2P17787 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.36■□□□□ 0.85
CHRNB2P17787 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.36■□□□□ 0.85
CHRNB2P17787 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.36■□□□□ 0.85
CHRNB2P17787 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.36■□□□□ 0.85
CHRNB2P17787 AL138781.2-201ENST00000617896 1843 ntBASIC20.36■□□□□ 0.85
CHRNB2P17787 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.36■□□□□ 0.85
CHRNB2P17787 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNB2P17787 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNB2P17787 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.36■□□□□ 0.85
CHRNB2P17787 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNB2P17787 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNB2P17787 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.35■□□□□ 0.85
CHRNB2P17787 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.35■□□□□ 0.85
CHRNB2P17787 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CHRNB2P17787 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNB2P17787 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNB2P17787 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNB2P17787 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.35■□□□□ 0.85
CHRNB2P17787 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNB2P17787 RPPH1-201ENST00000516869 333 ntBASIC20.35■□□□□ 0.85
CHRNB2P17787 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.35■□□□□ 0.85
CHRNB2P17787 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.35■□□□□ 0.85
CHRNB2P17787 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.35■□□□□ 0.85
CHRNB2P17787 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CHRNB2P17787 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNB2P17787 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNB2P17787 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNB2P17787 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNB2P17787 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
CHRNB2P17787 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNB2P17787 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNB2P17787 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.35■□□□□ 0.85
CHRNB2P17787 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNB2P17787 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNB2P17787 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.35■□□□□ 0.85
CHRNB2P17787 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.35■□□□□ 0.85
CHRNB2P17787 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.34■□□□□ 0.85
CHRNB2P17787 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.34■□□□□ 0.85
CHRNB2P17787 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.34■□□□□ 0.85
CHRNB2P17787 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNB2P17787 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNB2P17787 TSPY20P-201ENST00000450910 630 ntBASIC20.34■□□□□ 0.85
CHRNB2P17787 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.34■□□□□ 0.85
CHRNB2P17787 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.34■□□□□ 0.85
CHRNB2P17787 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRNB2P17787 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CHRNB2P17787 AL445675.2-201ENST00000620291 557 ntBASIC20.34■□□□□ 0.85
CHRNB2P17787 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNB2P17787 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRNB2P17787 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNB2P17787 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNB2P17787 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNB2P17787 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CHRNB2P17787 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNB2P17787 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNB2P17787 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNB2P17787 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNB2P17787 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
CHRNB2P17787 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNB2P17787 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CHRNB2P17787 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHRNB2P17787 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRNB2P17787 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.33■□□□□ 0.85
CHRNB2P17787 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHRNB2P17787 TSPY21P-201ENST00000433481 731 ntBASIC20.33■□□□□ 0.85
CHRNB2P17787 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.33■□□□□ 0.85
CHRNB2P17787 RPS2P4-201ENST00000476944 856 ntBASIC20.33■□□□□ 0.85
CHRNB2P17787 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CHRNB2P17787 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRNB2P17787 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.33■□□□□ 0.85
CHRNB2P17787 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRNB2P17787 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.33■□□□□ 0.84
CHRNB2P17787 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHRNB2P17787 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHRNB2P17787 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms