Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.74■□□□□ 0.43
UBL4AP11441 AC110285.5-201ENST00000611501 352 ntBASIC17.74■□□□□ 0.43
UBL4AP11441 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBL4AP11441 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
UBL4AP11441 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBL4AP11441 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UBL4AP11441 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBL4AP11441 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.74■□□□□ 0.43
UBL4AP11441 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBL4AP11441 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.74■□□□□ 0.43
UBL4AP11441 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
UBL4AP11441 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBL4AP11441 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBL4AP11441 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBL4AP11441 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBL4AP11441 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.73■□□□□ 0.43
UBL4AP11441 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBL4AP11441 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBL4AP11441 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBL4AP11441 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBL4AP11441 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.73■□□□□ 0.43
UBL4AP11441 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
UBL4AP11441 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBL4AP11441 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBL4AP11441 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.73■□□□□ 0.43
UBL4AP11441 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.73■□□□□ 0.43
UBL4AP11441 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
UBL4AP11441 ITM2C-210ENST00000620962 501 ntBASIC17.73■□□□□ 0.43
UBL4AP11441 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.73■□□□□ 0.43
UBL4AP11441 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBL4AP11441 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.73■□□□□ 0.43
UBL4AP11441 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.73■□□□□ 0.43
UBL4AP11441 AC104417.2-201ENST00000562989 1793 ntBASIC17.73■□□□□ 0.43
UBL4AP11441 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.73■□□□□ 0.43
UBL4AP11441 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.73■□□□□ 0.43
UBL4AP11441 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBL4AP11441 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.72■□□□□ 0.43
UBL4AP11441 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.72■□□□□ 0.43
UBL4AP11441 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.72■□□□□ 0.43
UBL4AP11441 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.72■□□□□ 0.43
UBL4AP11441 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
UBL4AP11441 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.72■□□□□ 0.43
UBL4AP11441 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.72■□□□□ 0.43
UBL4AP11441 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.72■□□□□ 0.43
UBL4AP11441 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
UBL4AP11441 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
UBL4AP11441 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.72■□□□□ 0.43
UBL4AP11441 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
UBL4AP11441 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBL4AP11441 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBL4AP11441 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBL4AP11441 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.71■□□□□ 0.43
UBL4AP11441 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBL4AP11441 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBL4AP11441 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.71■□□□□ 0.43
UBL4AP11441 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.71■□□□□ 0.43
UBL4AP11441 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBL4AP11441 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.71■□□□□ 0.43
UBL4AP11441 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBL4AP11441 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.71■□□□□ 0.43
UBL4AP11441 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
UBL4AP11441 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.71■□□□□ 0.43
UBL4AP11441 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBL4AP11441 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBL4AP11441 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.71■□□□□ 0.43
UBL4AP11441 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.71■□□□□ 0.42
UBL4AP11441 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.71■□□□□ 0.42
UBL4AP11441 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
UBL4AP11441 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
UBL4AP11441 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
UBL4AP11441 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBL4AP11441 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBL4AP11441 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBL4AP11441 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.7■□□□□ 0.42
UBL4AP11441 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBL4AP11441 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
UBL4AP11441 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.7■□□□□ 0.42
UBL4AP11441 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBL4AP11441 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBL4AP11441 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBL4AP11441 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms