Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CYP2D8P-201ENST00000433633 1490 ntBASIC22.54■■□□□ 1.2
TOP1P11387 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TOP1P11387 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TOP1P11387 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.53■■□□□ 1.2
TOP1P11387 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.53■■□□□ 1.2
TOP1P11387 AC096733.2-201ENST00000609937 1394 ntBASIC22.53■■□□□ 1.2
TOP1P11387 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
TOP1P11387 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.53■■□□□ 1.2
TOP1P11387 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
TOP1P11387 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TOP1P11387 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
TOP1P11387 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.53■■□□□ 1.2
TOP1P11387 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.53■■□□□ 1.2
TOP1P11387 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.53■■□□□ 1.2
TOP1P11387 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.53■■□□□ 1.2
TOP1P11387 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TOP1P11387 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.53■■□□□ 1.2
TOP1P11387 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TOP1P11387 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
TOP1P11387 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.53■■□□□ 1.2
TOP1P11387 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TOP1P11387 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TOP1P11387 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.52■■□□□ 1.2
TOP1P11387 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.52■■□□□ 1.2
TOP1P11387 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
TOP1P11387 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TOP1P11387 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.52■■□□□ 1.2
TOP1P11387 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TOP1P11387 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
TOP1P11387 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.52■■□□□ 1.2
TOP1P11387 PRR31-201ENST00000371629 978 ntTSL 2 BASIC22.52■■□□□ 1.2
TOP1P11387 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.52■■□□□ 1.2
TOP1P11387 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.52■■□□□ 1.2
TOP1P11387 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TOP1P11387 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.52■■□□□ 1.2
TOP1P11387 NAPSB-206ENST00000562112 1266 ntBASIC22.52■■□□□ 1.2
TOP1P11387 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.52■■□□□ 1.2
TOP1P11387 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.52■■□□□ 1.2
TOP1P11387 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.52■■□□□ 1.2
TOP1P11387 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.52■■□□□ 1.2
TOP1P11387 AC010947.1-201ENST00000623454 693 ntBASIC22.52■■□□□ 1.2
TOP1P11387 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
TOP1P11387 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TOP1P11387 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TOP1P11387 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TOP1P11387 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
TOP1P11387 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.52■■□□□ 1.2
TOP1P11387 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TOP1P11387 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
TOP1P11387 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.52■■□□□ 1.2
TOP1P11387 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
TOP1P11387 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.52■■□□□ 1.2
TOP1P11387 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TOP1P11387 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TOP1P11387 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
TOP1P11387 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.52■■□□□ 1.19
TOP1P11387 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TOP1P11387 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TOP1P11387 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
TOP1P11387 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TOP1P11387 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TOP1P11387 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.51■■□□□ 1.19
TOP1P11387 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TOP1P11387 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.51■■□□□ 1.19
TOP1P11387 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.51■■□□□ 1.19
TOP1P11387 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.51■■□□□ 1.19
TOP1P11387 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TOP1P11387 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TOP1P11387 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC22.51■■□□□ 1.19
TOP1P11387 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TOP1P11387 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.51■■□□□ 1.19
TOP1P11387 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TOP1P11387 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.51■■□□□ 1.19
TOP1P11387 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TOP1P11387 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TOP1P11387 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.5■■□□□ 1.19
TOP1P11387 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TOP1P11387 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TOP1P11387 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.5■■□□□ 1.19
TOP1P11387 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TOP1P11387 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TOP1P11387 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.5■■□□□ 1.19
TOP1P11387 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.5■■□□□ 1.19
TOP1P11387 MFAP1P1-201ENST00000442257 1255 ntBASIC22.5■■□□□ 1.19
TOP1P11387 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC22.5■■□□□ 1.19
TOP1P11387 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.5■■□□□ 1.19
TOP1P11387 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.5■■□□□ 1.19
TOP1P11387 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.5■■□□□ 1.19
TOP1P11387 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.5■■□□□ 1.19
TOP1P11387 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.19
TOP1P11387 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TOP1P11387 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TOP1P11387 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TOP1P11387 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.5■■□□□ 1.19
TOP1P11387 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TOP1P11387 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC22.5■■□□□ 1.19
TOP1P11387 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
TOP1P11387 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.5■■□□□ 1.19
TOP1P11387 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TOP1P11387 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms