Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1P09603 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CSF1P09603 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.58■□□□□ 0.24
CSF1P09603 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CSF1P09603 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1P09603 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1P09603 PHGDH-210ENST00000641115 1638 ntBASIC16.58■□□□□ 0.24
CSF1P09603 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1P09603 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1P09603 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1P09603 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1P09603 AL354751.1-201ENST00000412768 1863 ntBASIC16.58■□□□□ 0.24
CSF1P09603 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.58■□□□□ 0.24
CSF1P09603 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1P09603 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1P09603 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.58■□□□□ 0.24
CSF1P09603 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1P09603 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1P09603 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CSF1P09603 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1P09603 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CSF1P09603 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1P09603 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1P09603 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CSF1P09603 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.57■□□□□ 0.24
CSF1P09603 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1P09603 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CSF1P09603 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1P09603 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1P09603 NOC2LP1-202ENST00000452600 2235 ntBASIC16.57■□□□□ 0.24
CSF1P09603 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CSF1P09603 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1P09603 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.57■□□□□ 0.24
CSF1P09603 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1P09603 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.57■□□□□ 0.24
CSF1P09603 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.57■□□□□ 0.24
CSF1P09603 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.57■□□□□ 0.24
CSF1P09603 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CSF1P09603 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1P09603 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1P09603 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.57■□□□□ 0.24
CSF1P09603 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.57■□□□□ 0.24
CSF1P09603 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.57■□□□□ 0.24
CSF1P09603 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
CSF1P09603 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.57■□□□□ 0.24
CSF1P09603 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1P09603 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1P09603 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1P09603 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CSF1P09603 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1P09603 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1P09603 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1P09603 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CSF1P09603 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CSF1P09603 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.56■□□□□ 0.24
CSF1P09603 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CSF1P09603 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.56■□□□□ 0.24
CSF1P09603 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CSF1P09603 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 AL133373.2-201ENST00000623187 2828 ntBASIC16.56■□□□□ 0.24
CSF1P09603 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.56■□□□□ 0.24
CSF1P09603 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CSF1P09603 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.56■□□□□ 0.24
CSF1P09603 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 TEX21P-204ENST00000641479 1693 ntBASIC16.56■□□□□ 0.24
CSF1P09603 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1P09603 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.55■□□□□ 0.24
CSF1P09603 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSF1P09603 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.55■□□□□ 0.24
CSF1P09603 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.55■□□□□ 0.24
CSF1P09603 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.55■□□□□ 0.24
CSF1P09603 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.55■□□□□ 0.24
CSF1P09603 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.55■□□□□ 0.24
CSF1P09603 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSF1P09603 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSF1P09603 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSF1P09603 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CSF1P09603 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSF1P09603 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.55■□□□□ 0.24
CSF1P09603 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CSF1P09603 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSF1P09603 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.55■□□□□ 0.24
CSF1P09603 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.55■□□□□ 0.24
CSF1P09603 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.55■□□□□ 0.24
CSF1P09603 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSF1P09603 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSF1P09603 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms