Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPARCP09486 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPARCP09486 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.08■□□□□ 0.32
SPARCP09486 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPARCP09486 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPARCP09486 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPARCP09486 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPARCP09486 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPARCP09486 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.08■□□□□ 0.32
SPARCP09486 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
SPARCP09486 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.08■□□□□ 0.32
SPARCP09486 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.08■□□□□ 0.32
SPARCP09486 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.08■□□□□ 0.32
SPARCP09486 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.08■□□□□ 0.32
SPARCP09486 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.08■□□□□ 0.32
SPARCP09486 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.08■□□□□ 0.32
SPARCP09486 AC120498.8-201ENST00000614275 531 ntBASIC17.08■□□□□ 0.32
SPARCP09486 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SPARCP09486 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SPARCP09486 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SPARCP09486 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPARCP09486 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPARCP09486 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SPARCP09486 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPARCP09486 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 AC104417.2-201ENST00000562989 1793 ntBASIC17.07■□□□□ 0.32
SPARCP09486 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.07■□□□□ 0.32
SPARCP09486 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SPARCP09486 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SPARCP09486 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.07■□□□□ 0.32
SPARCP09486 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SPARCP09486 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.07■□□□□ 0.32
SPARCP09486 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.07■□□□□ 0.32
SPARCP09486 AC008687.6-201ENST00000596318 630 ntBASIC17.07■□□□□ 0.32
SPARCP09486 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
SPARCP09486 AC092666.2-201ENST00000613287 246 ntBASIC17.07■□□□□ 0.32
SPARCP09486 AC133041.1-202ENST00000642053 222 ntBASIC17.07■□□□□ 0.32
SPARCP09486 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SPARCP09486 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.07■□□□□ 0.32
SPARCP09486 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.07■□□□□ 0.32
SPARCP09486 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SPARCP09486 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.07■□□□□ 0.32
SPARCP09486 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SPARCP09486 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPARCP09486 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.07■□□□□ 0.32
SPARCP09486 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPARCP09486 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPARCP09486 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPARCP09486 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPARCP09486 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.06■□□□□ 0.32
SPARCP09486 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPARCP09486 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPARCP09486 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPARCP09486 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.06■□□□□ 0.32
SPARCP09486 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPARCP09486 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.06■□□□□ 0.32
SPARCP09486 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.06■□□□□ 0.32
SPARCP09486 TUBB8P6-201ENST00000436895 1288 ntBASIC17.06■□□□□ 0.32
SPARCP09486 AC069152.1-201ENST00000438030 544 ntBASIC17.06■□□□□ 0.32
SPARCP09486 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPARCP09486 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.06■□□□□ 0.32
SPARCP09486 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.06■□□□□ 0.32
SPARCP09486 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.06■□□□□ 0.32
SPARCP09486 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.06■□□□□ 0.32
SPARCP09486 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.06■□□□□ 0.32
SPARCP09486 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.06■□□□□ 0.32
SPARCP09486 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
SPARCP09486 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.06■□□□□ 0.32
SPARCP09486 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.06■□□□□ 0.32
SPARCP09486 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SPARCP09486 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SPARCP09486 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPARCP09486 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.06■□□□□ 0.32
SPARCP09486 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.06■□□□□ 0.32
SPARCP09486 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SPARCP09486 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.06■□□□□ 0.32
SPARCP09486 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SPARCP09486 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SPARCP09486 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPARCP09486 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SPARCP09486 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPARCP09486 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.06■□□□□ 0.32
SPARCP09486 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPARCP09486 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms