Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.37■□□□□ 0.69
RETP07949 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.37■□□□□ 0.69
RETP07949 AC012313.10-201ENST00000623509 926 ntBASIC19.37■□□□□ 0.69
RETP07949 AL023973.1-201ENST00000624619 620 ntBASIC19.37■□□□□ 0.69
RETP07949 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.37■□□□□ 0.69
RETP07949 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
RETP07949 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RETP07949 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RETP07949 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RETP07949 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.36■□□□□ 0.69
RETP07949 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RETP07949 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RETP07949 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.36■□□□□ 0.69
RETP07949 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
RETP07949 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RETP07949 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RETP07949 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RETP07949 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.36■□□□□ 0.69
RETP07949 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.36■□□□□ 0.69
RETP07949 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RETP07949 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RETP07949 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RETP07949 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RETP07949 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.36■□□□□ 0.69
RETP07949 AC116351.2-201ENST00000606540 1585 ntBASIC19.36■□□□□ 0.69
RETP07949 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 AC099778.1-201ENST00000568593 1911 ntBASIC19.35■□□□□ 0.69
RETP07949 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
RETP07949 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.35■□□□□ 0.69
RETP07949 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RETP07949 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RETP07949 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 AC246785.2-201ENST00000432512 513 ntBASIC19.35■□□□□ 0.69
RETP07949 ATP5G2P1-201ENST00000433580 426 ntBASIC19.35■□□□□ 0.69
RETP07949 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.35■□□□□ 0.69
RETP07949 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.35■□□□□ 0.69
RETP07949 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.35■□□□□ 0.69
RETP07949 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RETP07949 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.35■□□□□ 0.69
RETP07949 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.35■□□□□ 0.69
RETP07949 TFP1-202ENST00000475455 1573 ntBASIC19.35■□□□□ 0.69
RETP07949 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
RETP07949 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.35■□□□□ 0.69
RETP07949 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.34■□□□□ 0.69
RETP07949 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RETP07949 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RETP07949 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.34■□□□□ 0.69
RETP07949 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RETP07949 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RETP07949 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RETP07949 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RETP07949 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RETP07949 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.34■□□□□ 0.69
RETP07949 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.34■□□□□ 0.69
RETP07949 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.34■□□□□ 0.69
RETP07949 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.34■□□□□ 0.69
RETP07949 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
RETP07949 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.34■□□□□ 0.69
RETP07949 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.34■□□□□ 0.69
RETP07949 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RETP07949 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RETP07949 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RETP07949 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.34■□□□□ 0.69
RETP07949 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.34■□□□□ 0.69
RETP07949 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RETP07949 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.33■□□□□ 0.69
RETP07949 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RETP07949 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RETP07949 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RETP07949 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RETP07949 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.33■□□□□ 0.69
RETP07949 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.33■□□□□ 0.69
RETP07949 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.33■□□□□ 0.69
RETP07949 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RETP07949 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
RETP07949 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RETP07949 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RETP07949 KRT18P38-201ENST00000449496 1282 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms