Protein–RNA interactions for Protein: P04259

KRT6B, Keratin, type II cytoskeletal 6B, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6BP04259 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
KRT6BP04259 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT6BP04259 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT6BP04259 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.59■□□□□ 0.57
KRT6BP04259 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.59■□□□□ 0.57
KRT6BP04259 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT6BP04259 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT6BP04259 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.59■□□□□ 0.57
KRT6BP04259 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.59■□□□□ 0.57
KRT6BP04259 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
KRT6BP04259 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT6BP04259 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT6BP04259 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT6BP04259 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
KRT6BP04259 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT6BP04259 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT6BP04259 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
KRT6BP04259 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
KRT6BP04259 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT6BP04259 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT6BP04259 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
KRT6BP04259 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
KRT6BP04259 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
KRT6BP04259 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
KRT6BP04259 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
KRT6BP04259 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.58■□□□□ 0.57
KRT6BP04259 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
KRT6BP04259 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.58■□□□□ 0.56
KRT6BP04259 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
KRT6BP04259 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
KRT6BP04259 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT6BP04259 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
KRT6BP04259 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.58■□□□□ 0.56
KRT6BP04259 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.58■□□□□ 0.56
KRT6BP04259 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT6BP04259 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT6BP04259 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
KRT6BP04259 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT6BP04259 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT6BP04259 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT6BP04259 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT6BP04259 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
KRT6BP04259 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
KRT6BP04259 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
KRT6BP04259 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.57■□□□□ 0.56
KRT6BP04259 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.57■□□□□ 0.56
KRT6BP04259 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.57■□□□□ 0.56
KRT6BP04259 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.57■□□□□ 0.56
KRT6BP04259 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
KRT6BP04259 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
KRT6BP04259 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.57■□□□□ 0.56
KRT6BP04259 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT6BP04259 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.57■□□□□ 0.56
KRT6BP04259 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
KRT6BP04259 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.56■□□□□ 0.56
KRT6BP04259 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6BP04259 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6BP04259 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.56■□□□□ 0.56
KRT6BP04259 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.56■□□□□ 0.56
KRT6BP04259 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6BP04259 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6BP04259 AL049812.1-201ENST00000432563 2267 ntBASIC18.56■□□□□ 0.56
KRT6BP04259 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6BP04259 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6BP04259 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6BP04259 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
KRT6BP04259 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6BP04259 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6BP04259 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
KRT6BP04259 HLA-L-209ENST00000420110 1011 ntBASIC18.56■□□□□ 0.56
KRT6BP04259 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.56■□□□□ 0.56
KRT6BP04259 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.56■□□□□ 0.56
KRT6BP04259 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.56■□□□□ 0.56
KRT6BP04259 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.56■□□□□ 0.56
KRT6BP04259 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6BP04259 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.56■□□□□ 0.56
KRT6BP04259 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.56■□□□□ 0.56
KRT6BP04259 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.56■□□□□ 0.56
KRT6BP04259 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
KRT6BP04259 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
KRT6BP04259 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
KRT6BP04259 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms