Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 AL138781.1-201ENST00000566567 1274 ntBASIC17.23■□□□□ 0.35
HLA-DQA2P01906 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 AC060766.5-201ENST00000590539 871 ntBASIC17.23■□□□□ 0.35
HLA-DQA2P01906 AC092666.2-201ENST00000613287 246 ntBASIC17.23■□□□□ 0.35
HLA-DQA2P01906 AL109923.1-201ENST00000618799 583 ntBASIC17.23■□□□□ 0.35
HLA-DQA2P01906 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA2P01906 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 MYC-209ENST00000641252 345 ntBASIC17.22■□□□□ 0.35
HLA-DQA2P01906 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DQA2P01906 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 YBX1P10-201ENST00000444752 975 ntBASIC17.21■□□□□ 0.35
HLA-DQA2P01906 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA2P01906 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.21■□□□□ 0.34
HLA-DQA2P01906 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DQA2P01906 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DQA2P01906 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DQA2P01906 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.21■□□□□ 0.34
HLA-DQA2P01906 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DQA2P01906 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 AC098934.4-201ENST00000564127 592 ntBASIC17.2■□□□□ 0.34
HLA-DQA2P01906 SOX15-203ENST00000570788 1093 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms