Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PDGFBP01127 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFBP01127 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFBP01127 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFBP01127 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.31■□□□□ 0.68
PDGFBP01127 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFBP01127 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFBP01127 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PDGFBP01127 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PDGFBP01127 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.31■□□□□ 0.68
PDGFBP01127 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.31■□□□□ 0.68
PDGFBP01127 POLD2P1-201ENST00000511220 997 ntBASIC19.31■□□□□ 0.68
PDGFBP01127 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PDGFBP01127 AL136038.4-201ENST00000603606 1261 ntBASIC19.31■□□□□ 0.68
PDGFBP01127 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFBP01127 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFBP01127 AC036111.1-201ENST00000533973 1582 ntBASIC19.31■□□□□ 0.68
PDGFBP01127 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
PDGFBP01127 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PDGFBP01127 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.31■□□□□ 0.68
PDGFBP01127 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFBP01127 AC007225.1-201ENST00000566331 1836 ntBASIC19.3■□□□□ 0.68
PDGFBP01127 AF106564.1-201ENST00000607058 2553 ntBASIC19.3■□□□□ 0.68
PDGFBP01127 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFBP01127 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.3■□□□□ 0.68
PDGFBP01127 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.3■□□□□ 0.68
PDGFBP01127 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFBP01127 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.3■□□□□ 0.68
PDGFBP01127 TP73-AS1-207ENST00000624167 988 ntBASIC19.3■□□□□ 0.68
PDGFBP01127 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PDGFBP01127 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.3■□□□□ 0.68
PDGFBP01127 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFBP01127 GPAT2P1-201ENST00000444924 1672 ntBASIC19.3■□□□□ 0.68
PDGFBP01127 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.3■□□□□ 0.68
PDGFBP01127 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFBP01127 FEM1AP1-201ENST00000431297 1995 ntBASIC19.3■□□□□ 0.68
PDGFBP01127 FEM1AP4-201ENST00000443167 1987 ntBASIC19.3■□□□□ 0.68
PDGFBP01127 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFBP01127 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFBP01127 AL391807.1-203ENST00000604392 2365 ntBASIC19.29■□□□□ 0.68
PDGFBP01127 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFBP01127 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFBP01127 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFBP01127 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFBP01127 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFBP01127 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFBP01127 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFBP01127 FAM220CP-201ENST00000395253 831 ntBASIC19.29■□□□□ 0.68
PDGFBP01127 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFBP01127 HMGN1P19-201ENST00000436976 333 ntBASIC19.29■□□□□ 0.68
PDGFBP01127 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.29■□□□□ 0.68
PDGFBP01127 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.29■□□□□ 0.68
PDGFBP01127 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.29■□□□□ 0.68
PDGFBP01127 AC099336.1-202ENST00000602961 463 ntBASIC19.29■□□□□ 0.68
PDGFBP01127 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.29■□□□□ 0.68
PDGFBP01127 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFBP01127 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PDGFBP01127 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFBP01127 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFBP01127 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFBP01127 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.29■□□□□ 0.68
PDGFBP01127 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PDGFBP01127 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFBP01127 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFBP01127 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFBP01127 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFBP01127 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFBP01127 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFBP01127 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PDGFBP01127 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFBP01127 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.28■□□□□ 0.68
PDGFBP01127 SEC1P-202ENST00000473944 940 ntBASIC19.28■□□□□ 0.68
PDGFBP01127 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.28■□□□□ 0.68
PDGFBP01127 AP001005.1-201ENST00000571755 1248 ntBASIC19.28■□□□□ 0.68
PDGFBP01127 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.28■□□□□ 0.68
PDGFBP01127 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.28■□□□□ 0.68
PDGFBP01127 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.28■□□□□ 0.68
PDGFBP01127 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFBP01127 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.28■□□□□ 0.68
PDGFBP01127 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFBP01127 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFBP01127 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.28■□□□□ 0.68
PDGFBP01127 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFBP01127 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PDGFBP01127 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFBP01127 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFBP01127 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDGFBP01127 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDGFBP01127 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PDGFBP01127 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.27■□□□□ 0.68
PDGFBP01127 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.27■□□□□ 0.68
PDGFBP01127 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDGFBP01127 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.27■□□□□ 0.68
PDGFBP01127 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.27■□□□□ 0.68
PDGFBP01127 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDGFBP01127 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PDGFBP01127 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDGFBP01127 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDGFBP01127 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.27■□□□□ 0.68
PDGFBP01127 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms