Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 FP475955.4-201ENST00000623131 1990 ntBASIC18.37■□□□□ 0.53
SNRNP200O75643 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP200O75643 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.37■□□□□ 0.53
SNRNP200O75643 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.37■□□□□ 0.53
SNRNP200O75643 ECEL1P2-202ENST00000465689 757 ntBASIC18.37■□□□□ 0.53
SNRNP200O75643 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP200O75643 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.37■□□□□ 0.53
SNRNP200O75643 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP200O75643 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP200O75643 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
SNRNP200O75643 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP200O75643 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP200O75643 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SNRNP200O75643 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP200O75643 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP200O75643 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP200O75643 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP200O75643 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.36■□□□□ 0.53
SNRNP200O75643 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP200O75643 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SNRNP200O75643 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.36■□□□□ 0.53
SNRNP200O75643 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP200O75643 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.36■□□□□ 0.53
SNRNP200O75643 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
SNRNP200O75643 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP200O75643 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP200O75643 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP200O75643 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP200O75643 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNRNP200O75643 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNRNP200O75643 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP200O75643 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP200O75643 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP200O75643 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.35■□□□□ 0.53
SNRNP200O75643 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP200O75643 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP200O75643 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNRNP200O75643 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SNRNP200O75643 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP200O75643 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.35■□□□□ 0.53
SNRNP200O75643 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP200O75643 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP200O75643 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.35■□□□□ 0.53
SNRNP200O75643 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SNRNP200O75643 SLC25A3P1-201ENST00000443844 931 ntBASIC18.35■□□□□ 0.53
SNRNP200O75643 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.35■□□□□ 0.53
SNRNP200O75643 AP005242.2-201ENST00000580065 1175 ntBASIC18.35■□□□□ 0.53
SNRNP200O75643 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP200O75643 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.35■□□□□ 0.53
SNRNP200O75643 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP200O75643 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.35■□□□□ 0.53
SNRNP200O75643 AL049812.1-201ENST00000432563 2267 ntBASIC18.35■□□□□ 0.53
SNRNP200O75643 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP200O75643 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.35■□□□□ 0.53
SNRNP200O75643 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP200O75643 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP200O75643 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP200O75643 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP200O75643 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP200O75643 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
SNRNP200O75643 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.34■□□□□ 0.53
SNRNP200O75643 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP200O75643 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP200O75643 RCN1P1-201ENST00000400413 996 ntBASIC18.34■□□□□ 0.53
SNRNP200O75643 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.34■□□□□ 0.53
SNRNP200O75643 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.34■□□□□ 0.53
SNRNP200O75643 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SNRNP200O75643 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SNRNP200O75643 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.34■□□□□ 0.53
SNRNP200O75643 AC005332.7-201ENST00000614046 2005 ntBASIC18.34■□□□□ 0.53
SNRNP200O75643 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.34■□□□□ 0.53
SNRNP200O75643 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SNRNP200O75643 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.34■□□□□ 0.53
SNRNP200O75643 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP200O75643 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.34■□□□□ 0.53
SNRNP200O75643 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP200O75643 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP200O75643 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SNRNP200O75643 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP200O75643 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP200O75643 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SNRNP200O75643 AC145285.6-201ENST00000604632 637 ntBASIC18.34■□□□□ 0.53
SNRNP200O75643 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.34■□□□□ 0.53
SNRNP200O75643 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRNP200O75643 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRNP200O75643 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRNP200O75643 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRNP200O75643 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SNRNP200O75643 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.33■□□□□ 0.53
SNRNP200O75643 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SNRNP200O75643 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRNP200O75643 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRNP200O75643 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRNP200O75643 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRNP200O75643 LINC01568-207ENST00000641790 1380 ntBASIC18.33■□□□□ 0.53
SNRNP200O75643 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRNP200O75643 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.33■□□□□ 0.52
SNRNP200O75643 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRNP200O75643 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRNP200O75643 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms