Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
BRD4O60885 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
BRD4O60885 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
BRD4O60885 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC26.58■■□□□ 1.84
BRD4O60885 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.84
BRD4O60885 COX11P1-201ENST00000489116 835 ntBASIC26.58■■□□□ 1.84
BRD4O60885 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC26.58■■□□□ 1.84
BRD4O60885 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.84
BRD4O60885 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
BRD4O60885 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC26.57■■□□□ 1.84
BRD4O60885 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC26.57■■□□□ 1.84
BRD4O60885 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
BRD4O60885 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
BRD4O60885 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
BRD4O60885 COPE-203ENST00000351079 907 ntTSL 2 BASIC26.57■■□□□ 1.84
BRD4O60885 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
BRD4O60885 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
BRD4O60885 AL031133.1-201ENST00000406807 723 ntBASIC26.57■■□□□ 1.84
BRD4O60885 AL160286.2-201ENST00000567150 934 ntBASIC26.57■■□□□ 1.84
BRD4O60885 AC139887.4-201ENST00000607877 719 ntBASIC26.57■■□□□ 1.84
BRD4O60885 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
BRD4O60885 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC26.56■■□□□ 1.84
BRD4O60885 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC26.56■■□□□ 1.84
BRD4O60885 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
BRD4O60885 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
BRD4O60885 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
BRD4O60885 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
BRD4O60885 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
BRD4O60885 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
BRD4O60885 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC26.56■■□□□ 1.84
BRD4O60885 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC26.56■■□□□ 1.84
BRD4O60885 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC26.56■■□□□ 1.84
BRD4O60885 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
BRD4O60885 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC26.56■■□□□ 1.84
BRD4O60885 AC141257.4-201ENST00000634557 245 ntBASIC26.56■■□□□ 1.84
BRD4O60885 AC136944.6-201ENST00000634818 245 ntBASIC26.56■■□□□ 1.84
BRD4O60885 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
BRD4O60885 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
BRD4O60885 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC26.55■■□□□ 1.84
BRD4O60885 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
BRD4O60885 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC26.55■■□□□ 1.84
BRD4O60885 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC26.55■■□□□ 1.84
BRD4O60885 TSPY5P-201ENST00000426936 936 ntBASIC26.55■■□□□ 1.84
BRD4O60885 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC26.55■■□□□ 1.84
BRD4O60885 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC26.55■■□□□ 1.84
BRD4O60885 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
BRD4O60885 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
BRD4O60885 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
BRD4O60885 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
BRD4O60885 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
BRD4O60885 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
BRD4O60885 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
BRD4O60885 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
BRD4O60885 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
BRD4O60885 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC26.54■■□□□ 1.84
BRD4O60885 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
BRD4O60885 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
BRD4O60885 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC26.54■■□□□ 1.84
BRD4O60885 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
BRD4O60885 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
BRD4O60885 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
BRD4O60885 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
BRD4O60885 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC26.54■■□□□ 1.84
BRD4O60885 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
BRD4O60885 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC26.54■■□□□ 1.84
BRD4O60885 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC26.54■■□□□ 1.84
BRD4O60885 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC26.54■■□□□ 1.84
BRD4O60885 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
BRD4O60885 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC26.54■■□□□ 1.84
BRD4O60885 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
BRD4O60885 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
BRD4O60885 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
BRD4O60885 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC26.54■■□□□ 1.84
BRD4O60885 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
BRD4O60885 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
BRD4O60885 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
BRD4O60885 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
BRD4O60885 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC26.53■■□□□ 1.84
BRD4O60885 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
BRD4O60885 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC26.53■■□□□ 1.84
BRD4O60885 AL358472.4-201ENST00000633140 710 ntBASIC26.53■■□□□ 1.84
BRD4O60885 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC26.53■■□□□ 1.84
BRD4O60885 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
BRD4O60885 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC26.53■■□□□ 1.84
BRD4O60885 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
BRD4O60885 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
BRD4O60885 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC26.53■■□□□ 1.84
BRD4O60885 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
BRD4O60885 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
BRD4O60885 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
BRD4O60885 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC26.52■■□□□ 1.84
BRD4O60885 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC26.52■■□□□ 1.84
BRD4O60885 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC26.52■■□□□ 1.84
BRD4O60885 CLN6-204ENST00000564752 900 ntTSL 3 BASIC26.52■■□□□ 1.84
BRD4O60885 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC26.52■■□□□ 1.84
BRD4O60885 AL031432.5-201ENST00000641059 760 ntBASIC26.52■■□□□ 1.84
BRD4O60885 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
BRD4O60885 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
BRD4O60885 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
BRD4O60885 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms