Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.3■□□□□ 0.36
ZIC3O60481 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.29■□□□□ 0.36
ZIC3O60481 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC3O60481 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC3O60481 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC3O60481 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.29■□□□□ 0.36
ZIC3O60481 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC3O60481 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC3O60481 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC3O60481 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.29■□□□□ 0.36
ZIC3O60481 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ZIC3O60481 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC3O60481 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC3O60481 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC3O60481 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.29■□□□□ 0.36
ZIC3O60481 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.29■□□□□ 0.36
ZIC3O60481 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
ZIC3O60481 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC3O60481 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.29■□□□□ 0.36
ZIC3O60481 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC3O60481 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC3O60481 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
ZIC3O60481 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.29■□□□□ 0.36
ZIC3O60481 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC3O60481 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZIC3O60481 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.29■□□□□ 0.36
ZIC3O60481 TEX21P-204ENST00000641479 1693 ntBASIC17.29■□□□□ 0.36
ZIC3O60481 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.29■□□□□ 0.36
ZIC3O60481 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
ZIC3O60481 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.28■□□□□ 0.36
ZIC3O60481 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC3O60481 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC3O60481 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC3O60481 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC3O60481 AL032819.2-201ENST00000624543 2162 ntBASIC17.28■□□□□ 0.36
ZIC3O60481 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC3O60481 TSPY14P-201ENST00000303979 915 ntBASIC17.28■□□□□ 0.36
ZIC3O60481 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC3O60481 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.28■□□□□ 0.36
ZIC3O60481 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.28■□□□□ 0.36
ZIC3O60481 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ZIC3O60481 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.28■□□□□ 0.36
ZIC3O60481 C2orf69P3-201ENST00000565542 1120 ntBASIC17.28■□□□□ 0.36
ZIC3O60481 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC3O60481 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.28■□□□□ 0.36
ZIC3O60481 LINC01023-201ENST00000606054 436 ntBASIC17.28■□□□□ 0.36
ZIC3O60481 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.28■□□□□ 0.36
ZIC3O60481 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC3O60481 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.28■□□□□ 0.36
ZIC3O60481 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC3O60481 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ZIC3O60481 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC3O60481 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ZIC3O60481 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC3O60481 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC3O60481 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC3O60481 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC3O60481 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC3O60481 LINC01568-207ENST00000641790 1380 ntBASIC17.28■□□□□ 0.36
ZIC3O60481 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZIC3O60481 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ZIC3O60481 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ZIC3O60481 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZIC3O60481 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZIC3O60481 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZIC3O60481 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ZIC3O60481 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZIC3O60481 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ZIC3O60481 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.27■□□□□ 0.36
ZIC3O60481 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZIC3O60481 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZIC3O60481 SLC25A24-204ENST00000569674 2357 ntBASIC17.27■□□□□ 0.36
ZIC3O60481 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.27■□□□□ 0.36
ZIC3O60481 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
ZIC3O60481 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.27■□□□□ 0.36
ZIC3O60481 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZIC3O60481 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.27■□□□□ 0.36
ZIC3O60481 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZIC3O60481 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.27■□□□□ 0.36
ZIC3O60481 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.27■□□□□ 0.36
ZIC3O60481 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.27■□□□□ 0.36
ZIC3O60481 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.27■□□□□ 0.36
ZIC3O60481 AC145285.6-201ENST00000604632 637 ntBASIC17.27■□□□□ 0.36
ZIC3O60481 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
ZIC3O60481 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZIC3O60481 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZIC3O60481 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.27■□□□□ 0.35
ZIC3O60481 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.27■□□□□ 0.35
ZIC3O60481 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ZIC3O60481 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.27■□□□□ 0.35
ZIC3O60481 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZIC3O60481 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZIC3O60481 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
ZIC3O60481 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ZIC3O60481 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
ZIC3O60481 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZIC3O60481 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.26■□□□□ 0.35
ZIC3O60481 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZIC3O60481 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms