Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MIR6786-201ENST00000616843 113 ntBASIC18.38■□□□□ 0.53
LCMT2O60294 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCMT2O60294 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCMT2O60294 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LCMT2O60294 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.38■□□□□ 0.53
LCMT2O60294 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.38■□□□□ 0.53
LCMT2O60294 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCMT2O60294 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCMT2O60294 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCMT2O60294 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LCMT2O60294 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCMT2O60294 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LCMT2O60294 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCMT2O60294 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCMT2O60294 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCMT2O60294 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LCMT2O60294 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
LCMT2O60294 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.37■□□□□ 0.53
LCMT2O60294 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.37■□□□□ 0.53
LCMT2O60294 AC004951.3-201ENST00000418645 1148 ntBASIC18.37■□□□□ 0.53
LCMT2O60294 AL355355.2-201ENST00000442321 338 ntBASIC18.37■□□□□ 0.53
LCMT2O60294 B3GAT3P1-201ENST00000471720 806 ntBASIC18.37■□□□□ 0.53
LCMT2O60294 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LCMT2O60294 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.37■□□□□ 0.53
LCMT2O60294 AC026271.3-201ENST00000571884 352 ntBASIC18.37■□□□□ 0.53
LCMT2O60294 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LCMT2O60294 MIR4497-201ENST00000583208 89 ntBASIC18.37■□□□□ 0.53
LCMT2O60294 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
LCMT2O60294 REXO1L10P-201ENST00000615707 1290 ntBASIC18.37■□□□□ 0.53
LCMT2O60294 REXO1L12P-201ENST00000622156 912 ntBASIC18.37■□□□□ 0.53
LCMT2O60294 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCMT2O60294 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCMT2O60294 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LCMT2O60294 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.37■□□□□ 0.53
LCMT2O60294 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCMT2O60294 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCMT2O60294 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCMT2O60294 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.37■□□□□ 0.53
LCMT2O60294 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.37■□□□□ 0.53
LCMT2O60294 AC141586.3-201ENST00000562166 1838 ntBASIC18.37■□□□□ 0.53
LCMT2O60294 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LCMT2O60294 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCMT2O60294 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LCMT2O60294 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCMT2O60294 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCMT2O60294 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LCMT2O60294 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LCMT2O60294 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LCMT2O60294 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
LCMT2O60294 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LCMT2O60294 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCMT2O60294 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.36■□□□□ 0.53
LCMT2O60294 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.36■□□□□ 0.53
LCMT2O60294 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.36■□□□□ 0.53
LCMT2O60294 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.36■□□□□ 0.53
LCMT2O60294 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.36■□□□□ 0.53
LCMT2O60294 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCMT2O60294 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.36■□□□□ 0.53
LCMT2O60294 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
LCMT2O60294 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.36■□□□□ 0.53
LCMT2O60294 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.36■□□□□ 0.53
LCMT2O60294 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.36■□□□□ 0.53
LCMT2O60294 AC011298.2-201ENST00000617989 482 ntBASIC18.36■□□□□ 0.53
LCMT2O60294 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCMT2O60294 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
LCMT2O60294 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LCMT2O60294 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCMT2O60294 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LCMT2O60294 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCMT2O60294 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCMT2O60294 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCMT2O60294 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.35■□□□□ 0.53
LCMT2O60294 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LCMT2O60294 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LCMT2O60294 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LCMT2O60294 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LCMT2O60294 FSCN1P1-201ENST00000568912 1481 ntBASIC18.35■□□□□ 0.53
LCMT2O60294 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LCMT2O60294 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCMT2O60294 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCMT2O60294 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCMT2O60294 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.35■□□□□ 0.53
LCMT2O60294 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LCMT2O60294 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.35■□□□□ 0.53
LCMT2O60294 AP003071.4-201ENST00000562276 1284 ntBASIC18.35■□□□□ 0.53
LCMT2O60294 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.35■□□□□ 0.53
LCMT2O60294 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.35■□□□□ 0.53
LCMT2O60294 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCMT2O60294 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LCMT2O60294 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LCMT2O60294 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LCMT2O60294 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LCMT2O60294 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.35■□□□□ 0.53
LCMT2O60294 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.34■□□□□ 0.53
LCMT2O60294 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCMT2O60294 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LCMT2O60294 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCMT2O60294 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCMT2O60294 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LCMT2O60294 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms