Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD6O43541 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.42■□□□□ 0.7
SMAD6O43541 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD6O43541 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.42■□□□□ 0.7
SMAD6O43541 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.42■□□□□ 0.7
SMAD6O43541 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.42■□□□□ 0.7
SMAD6O43541 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD6O43541 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD6O43541 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD6O43541 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.42■□□□□ 0.7
SMAD6O43541 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.42■□□□□ 0.7
SMAD6O43541 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.41■□□□□ 0.7
SMAD6O43541 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SMAD6O43541 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.41■□□□□ 0.7
SMAD6O43541 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.41■□□□□ 0.7
SMAD6O43541 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SMAD6O43541 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 RCN1P1-201ENST00000400413 996 ntBASIC19.41■□□□□ 0.7
SMAD6O43541 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SMAD6O43541 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SMAD6O43541 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.41■□□□□ 0.7
SMAD6O43541 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SMAD6O43541 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.41■□□□□ 0.7
SMAD6O43541 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD6O43541 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD6O43541 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.4■□□□□ 0.7
SMAD6O43541 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD6O43541 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.4■□□□□ 0.7
SMAD6O43541 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD6O43541 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SMAD6O43541 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD6O43541 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD6O43541 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD6O43541 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD6O43541 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SMAD6O43541 FAM210CP-201ENST00000445714 574 ntBASIC19.4■□□□□ 0.7
SMAD6O43541 PRSS44-201ENST00000515154 1146 ntBASIC19.4■□□□□ 0.7
SMAD6O43541 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SMAD6O43541 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SMAD6O43541 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD6O43541 AC093484.2-201ENST00000580996 2166 ntBASIC19.4■□□□□ 0.7
SMAD6O43541 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD6O43541 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD6O43541 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SMAD6O43541 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMAD6O43541 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SMAD6O43541 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMAD6O43541 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.39■□□□□ 0.7
SMAD6O43541 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
SMAD6O43541 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SMAD6O43541 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD6O43541 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD6O43541 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
SMAD6O43541 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.39■□□□□ 0.69
SMAD6O43541 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD6O43541 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.39■□□□□ 0.69
SMAD6O43541 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.39■□□□□ 0.69
SMAD6O43541 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.39■□□□□ 0.69
SMAD6O43541 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.39■□□□□ 0.69
SMAD6O43541 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.39■□□□□ 0.69
SMAD6O43541 FAM87A-204ENST00000613235 858 ntBASIC19.39■□□□□ 0.69
SMAD6O43541 AL023803.3-201ENST00000615559 522 ntBASIC19.39■□□□□ 0.69
SMAD6O43541 AC005363.2-201ENST00000618631 242 ntBASIC19.39■□□□□ 0.69
SMAD6O43541 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SMAD6O43541 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD6O43541 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD6O43541 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD6O43541 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.39■□□□□ 0.69
SMAD6O43541 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.39■□□□□ 0.69
SMAD6O43541 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD6O43541 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD6O43541 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD6O43541 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD6O43541 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMAD6O43541 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.38■□□□□ 0.69
SMAD6O43541 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.38■□□□□ 0.69
SMAD6O43541 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMAD6O43541 AC005521.1-201ENST00000393351 872 ntBASIC19.38■□□□□ 0.69
SMAD6O43541 TSPY21P-201ENST00000433481 731 ntBASIC19.38■□□□□ 0.69
SMAD6O43541 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.38■□□□□ 0.69
SMAD6O43541 SLC25A3P1-201ENST00000443844 931 ntBASIC19.38■□□□□ 0.69
SMAD6O43541 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMAD6O43541 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.38■□□□□ 0.69
SMAD6O43541 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMAD6O43541 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms