Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SMAD9O15198 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SMAD9O15198 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.41■□□□□ 0.38
SMAD9O15198 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.41■□□□□ 0.38
SMAD9O15198 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.41■□□□□ 0.38
SMAD9O15198 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SMAD9O15198 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SMAD9O15198 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SMAD9O15198 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
SMAD9O15198 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SMAD9O15198 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.41■□□□□ 0.38
SMAD9O15198 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SMAD9O15198 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.41■□□□□ 0.38
SMAD9O15198 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.41■□□□□ 0.38
SMAD9O15198 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.4■□□□□ 0.38
SMAD9O15198 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.4■□□□□ 0.38
SMAD9O15198 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD9O15198 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD9O15198 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
SMAD9O15198 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.4■□□□□ 0.38
SMAD9O15198 AL135905.2-201ENST00000584934 1404 ntBASIC17.4■□□□□ 0.38
SMAD9O15198 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SMAD9O15198 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.4■□□□□ 0.38
SMAD9O15198 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD9O15198 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD9O15198 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMAD9O15198 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.4■□□□□ 0.38
SMAD9O15198 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD9O15198 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD9O15198 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.4■□□□□ 0.38
SMAD9O15198 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.4■□□□□ 0.38
SMAD9O15198 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.4■□□□□ 0.38
SMAD9O15198 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD9O15198 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.4■□□□□ 0.38
SMAD9O15198 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD9O15198 AF186192.3-201ENST00000583427 947 ntBASIC17.4■□□□□ 0.38
SMAD9O15198 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.4■□□□□ 0.38
SMAD9O15198 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD9O15198 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD9O15198 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMAD9O15198 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD9O15198 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SMAD9O15198 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD9O15198 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD9O15198 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD9O15198 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.4■□□□□ 0.38
SMAD9O15198 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD9O15198 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.4■□□□□ 0.38
SMAD9O15198 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMAD9O15198 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD9O15198 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD9O15198 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD9O15198 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD9O15198 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SMAD9O15198 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD9O15198 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD9O15198 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD9O15198 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD9O15198 RPS2P55-201ENST00000397318 883 ntBASIC17.39■□□□□ 0.37
SMAD9O15198 AL353807.1-201ENST00000427475 662 ntBASIC17.39■□□□□ 0.37
SMAD9O15198 AC012618.2-201ENST00000428058 849 ntBASIC17.39■□□□□ 0.37
SMAD9O15198 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD9O15198 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD9O15198 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.39■□□□□ 0.37
SMAD9O15198 AC107956.1-201ENST00000494359 873 ntBASIC17.39■□□□□ 0.37
SMAD9O15198 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.39■□□□□ 0.37
SMAD9O15198 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD9O15198 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD9O15198 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.39■□□□□ 0.37
SMAD9O15198 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.39■□□□□ 0.37
SMAD9O15198 Z99916.2-201ENST00000604037 246 ntBASIC17.39■□□□□ 0.37
SMAD9O15198 AL353708.3-201ENST00000610272 989 ntBASIC17.39■□□□□ 0.37
SMAD9O15198 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SMAD9O15198 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD9O15198 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD9O15198 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.39■□□□□ 0.37
SMAD9O15198 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD9O15198 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms