Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RTCAO00442 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTCAO00442 AL049812.1-201ENST00000432563 2267 ntBASIC18.32■□□□□ 0.52
RTCAO00442 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RTCAO00442 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.31■□□□□ 0.52
RTCAO00442 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTCAO00442 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTCAO00442 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTCAO00442 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
RTCAO00442 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RTCAO00442 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTCAO00442 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.31■□□□□ 0.52
RTCAO00442 NIFKP9-201ENST00000419265 221 ntBASIC18.31■□□□□ 0.52
RTCAO00442 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.31■□□□□ 0.52
RTCAO00442 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.31■□□□□ 0.52
RTCAO00442 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTCAO00442 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTCAO00442 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTCAO00442 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTCAO00442 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RTCAO00442 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.31■□□□□ 0.52
RTCAO00442 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTCAO00442 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.31■□□□□ 0.52
RTCAO00442 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTCAO00442 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTCAO00442 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTCAO00442 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTCAO00442 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTCAO00442 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTCAO00442 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTCAO00442 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTCAO00442 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTCAO00442 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTCAO00442 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.3■□□□□ 0.52
RTCAO00442 AL161938.1-201ENST00000569833 2180 ntBASIC18.3■□□□□ 0.52
RTCAO00442 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
RTCAO00442 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RTCAO00442 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTCAO00442 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTCAO00442 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RTCAO00442 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.3■□□□□ 0.52
RTCAO00442 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RTCAO00442 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.3■□□□□ 0.52
RTCAO00442 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.3■□□□□ 0.52
RTCAO00442 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.3■□□□□ 0.52
RTCAO00442 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.3■□□□□ 0.52
RTCAO00442 RARRES2P10-201ENST00000564312 460 ntBASIC18.3■□□□□ 0.52
RTCAO00442 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.3■□□□□ 0.52
RTCAO00442 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.3■□□□□ 0.52
RTCAO00442 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTCAO00442 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.3■□□□□ 0.52
RTCAO00442 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTCAO00442 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTCAO00442 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.3■□□□□ 0.52
RTCAO00442 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTCAO00442 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.3■□□□□ 0.52
RTCAO00442 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTCAO00442 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTCAO00442 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTCAO00442 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.29■□□□□ 0.52
RTCAO00442 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTCAO00442 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTCAO00442 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.29■□□□□ 0.52
RTCAO00442 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTCAO00442 AF186192.3-201ENST00000583427 947 ntBASIC18.29■□□□□ 0.52
RTCAO00442 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RTCAO00442 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.29■□□□□ 0.52
RTCAO00442 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTCAO00442 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.29■□□□□ 0.52
RTCAO00442 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTCAO00442 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTCAO00442 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTCAO00442 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTCAO00442 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTCAO00442 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTCAO00442 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
RTCAO00442 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTCAO00442 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTCAO00442 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RTCAO00442 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTCAO00442 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RTCAO00442 AC018445.3-201ENST00000624177 1945 ntBASIC18.28■□□□□ 0.52
RTCAO00442 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTCAO00442 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTCAO00442 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTCAO00442 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTCAO00442 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RTCAO00442 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTCAO00442 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTCAO00442 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTCAO00442 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTCAO00442 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTCAO00442 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTCAO00442 UBE2SP1-201ENST00000450587 669 ntBASIC18.28■□□□□ 0.52
RTCAO00442 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.28■□□□□ 0.52
RTCAO00442 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.28■□□□□ 0.52
RTCAO00442 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.28■□□□□ 0.52
RTCAO00442 AL445675.2-201ENST00000620291 557 ntBASIC18.28■□□□□ 0.52
RTCAO00442 CR392000.1-201ENST00000624770 1228 ntBASIC18.28■□□□□ 0.52
RTCAO00442 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms