Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM49D1C9J1S8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM49D1C9J1S8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM49D1C9J1S8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM49D1C9J1S8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRIM49D1C9J1S8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TRIM49D1C9J1S8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRIM49D1C9J1S8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRIM49D1C9J1S8 KRT8P8-201ENST00000434750 1448 ntBASIC19.24■□□□□ 0.67
TRIM49D1C9J1S8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM49D1C9J1S8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRIM49D1C9J1S8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM49D1C9J1S8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM49D1C9J1S8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 AC135050.7-201ENST00000624508 2218 ntBASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 AC080038.1-201ENST00000611274 1154 ntBASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 AC073111.5-205ENST00000641717 521 ntBASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM49D1C9J1S8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 AL390961.4-201ENST00000623958 2535 ntBASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 AP006587.1-201ENST00000534129 1502 ntBASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM49D1C9J1S8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 YBX1P10-201ENST00000444752 975 ntBASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM49D1C9J1S8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM49D1C9J1S8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM49D1C9J1S8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRIM49D1C9J1S8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM49D1C9J1S8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM49D1C9J1S8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.2■□□□□ 0.66
TRIM49D1C9J1S8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM49D1C9J1S8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM49D1C9J1S8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM49D1C9J1S8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM49D1C9J1S8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM49D1C9J1S8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM49D1C9J1S8 DUSP5P2-201ENST00000426873 1033 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms