Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC28.43■■■□□ 2.14
HFM1A2PYH4 AC008622.2-201ENST00000617006 1229 ntBASIC28.43■■■□□ 2.14
HFM1A2PYH4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
HFM1A2PYH4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
HFM1A2PYH4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
HFM1A2PYH4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
HFM1A2PYH4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC28.43■■■□□ 2.14
HFM1A2PYH4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
HFM1A2PYH4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC28.43■■■□□ 2.14
HFM1A2PYH4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC28.43■■■□□ 2.14
HFM1A2PYH4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
HFM1A2PYH4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
HFM1A2PYH4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC28.43■■■□□ 2.14
HFM1A2PYH4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
HFM1A2PYH4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
HFM1A2PYH4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC28.43■■■□□ 2.14
HFM1A2PYH4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC28.43■■■□□ 2.14
HFM1A2PYH4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
HFM1A2PYH4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
HFM1A2PYH4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
HFM1A2PYH4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC28.42■■■□□ 2.14
HFM1A2PYH4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
HFM1A2PYH4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC28.42■■■□□ 2.14
HFM1A2PYH4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
HFM1A2PYH4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
HFM1A2PYH4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
HFM1A2PYH4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
HFM1A2PYH4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC28.42■■■□□ 2.14
HFM1A2PYH4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC28.42■■■□□ 2.14
HFM1A2PYH4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC28.42■■■□□ 2.14
HFM1A2PYH4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
HFM1A2PYH4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC28.42■■■□□ 2.14
HFM1A2PYH4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
HFM1A2PYH4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
HFM1A2PYH4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC28.41■■■□□ 2.14
HFM1A2PYH4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
HFM1A2PYH4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC28.41■■■□□ 2.14
HFM1A2PYH4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
HFM1A2PYH4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
HFM1A2PYH4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
HFM1A2PYH4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC28.41■■■□□ 2.14
HFM1A2PYH4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC28.41■■■□□ 2.14
HFM1A2PYH4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC28.41■■■□□ 2.14
HFM1A2PYH4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC28.41■■■□□ 2.14
HFM1A2PYH4 AL137013.1-201ENST00000432946 1228 ntBASIC28.41■■■□□ 2.14
HFM1A2PYH4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
HFM1A2PYH4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC28.41■■■□□ 2.14
HFM1A2PYH4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
HFM1A2PYH4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC28.41■■■□□ 2.14
HFM1A2PYH4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
HFM1A2PYH4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
HFM1A2PYH4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC28.4■■■□□ 2.14
HFM1A2PYH4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
HFM1A2PYH4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
HFM1A2PYH4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC28.4■■■□□ 2.14
HFM1A2PYH4 KRT8P3-201ENST00000519669 1449 ntBASIC28.4■■■□□ 2.14
HFM1A2PYH4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
HFM1A2PYH4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC28.4■■■□□ 2.14
HFM1A2PYH4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC28.4■■■□□ 2.14
HFM1A2PYH4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC28.4■■■□□ 2.14
HFM1A2PYH4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
HFM1A2PYH4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC28.4■■■□□ 2.14
HFM1A2PYH4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC28.4■■■□□ 2.14
HFM1A2PYH4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
HFM1A2PYH4 KRT18P35-201ENST00000510488 1269 ntBASIC28.4■■■□□ 2.14
HFM1A2PYH4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC28.4■■■□□ 2.14
HFM1A2PYH4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC28.4■■■□□ 2.14
HFM1A2PYH4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC28.4■■■□□ 2.14
HFM1A2PYH4 IRX1P1-201ENST00000438849 1838 ntBASIC28.4■■■□□ 2.14
HFM1A2PYH4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
HFM1A2PYH4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC28.4■■■□□ 2.14
HFM1A2PYH4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC28.4■■■□□ 2.14
HFM1A2PYH4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
HFM1A2PYH4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
HFM1A2PYH4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
HFM1A2PYH4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
HFM1A2PYH4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
HFM1A2PYH4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
HFM1A2PYH4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC28.39■■■□□ 2.14
HFM1A2PYH4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
HFM1A2PYH4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
HFM1A2PYH4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
HFM1A2PYH4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.13
HFM1A2PYH4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
HFM1A2PYH4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
HFM1A2PYH4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
HFM1A2PYH4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC28.38■■■□□ 2.13
HFM1A2PYH4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
HFM1A2PYH4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
HFM1A2PYH4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
HFM1A2PYH4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
HFM1A2PYH4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
HFM1A2PYH4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
HFM1A2PYH4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
HFM1A2PYH4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC28.38■■■□□ 2.13
HFM1A2PYH4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
HFM1A2PYH4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
HFM1A2PYH4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
HFM1A2PYH4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
HFM1A2PYH4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC28.37■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms