Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC142381.4-202ENST00000563973 229 ntBASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 AC073195.1-201ENST00000607241 877 ntBASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 AC093525.10-201ENST00000625130 1569 ntBASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 KRT16P1-201ENST00000399124 1418 ntBASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 MESTP1-201ENST00000404287 994 ntBASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.04■□□□□ 0.8
TCRBV5S1A1TA0A578 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 AC026271.3-201ENST00000571884 352 ntBASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 FAM197Y4-202ENST00000622692 608 ntBASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBV5S1A1TA0A578 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 AL138781.2-201ENST00000617896 1843 ntBASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 AC011506.1-201ENST00000474329 610 ntBASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 CR392000.1-201ENST00000624770 1228 ntBASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 AL031598.1-201ENST00000561511 1773 ntBASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TCRBV5S1A1TA0A578 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TCRBV5S1A1TA0A578 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TCRBV5S1A1TA0A578 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
TCRBV5S1A1TA0A578 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TCRBV5S1A1TA0A578 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TCRBV5S1A1TA0A578 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.02■□□□□ 0.79
TCRBV5S1A1TA0A578 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.01■□□□□ 0.79
TCRBV5S1A1TA0A578 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.01■□□□□ 0.79
TCRBV5S1A1TA0A578 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV5S1A1TA0A578 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV5S1A1TA0A578 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV5S1A1TA0A578 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV5S1A1TA0A578 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.01■□□□□ 0.79
TCRBV5S1A1TA0A578 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms