Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 AL355001.2-201ENST00000620617 1191 ntBASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV12-1A0A0B4J245 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 AC009299.2-201ENST00000482477 511 ntBASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 LINC00896-202ENST00000609602 2128 ntBASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV12-1A0A0B4J245 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 ZNF815P-204ENST00000434898 1737 ntBASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 HLA-G-202ENST00000376815 851 ntBASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 HLA-G-203ENST00000376818 1127 ntBASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 AC009053.2-201ENST00000563701 2365 ntBASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms