Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC074050.1-201ENST00000563247 211 ntBASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 AC012182.1-201ENST00000570133 895 ntBASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 AC017100.2-201ENST00000584628 355 ntBASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 AC006504.3-201ENST00000586818 523 ntBASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 AC025588.3-201ENST00000604182 274 ntBASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 AL355493.4-201ENST00000618530 292 ntBASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 AC020923.1-201ENST00000624021 917 ntBASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 AC092593.1-201ENST00000515413 1815 ntBASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 AC092435.3-201ENST00000565538 3654 ntBASIC2.6□□□□□ -1.99
UBQLN4Q9NRR5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 AC046144.1-201ENST00000478559 1853 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 RNU6-543P-201ENST00000362576 108 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 SNORA44-201ENST00000384584 132 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 TAF9BP2-201ENST00000400856 499 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 AL513043.1-201ENST00000439124 535 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 XKRY2-201ENST00000442362 1093 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 snoU13.4-201ENST00000458916 104 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 RPS29P26-201ENST00000477483 171 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 SNORA9.3-201ENST00000516383 129 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 AC239860.2-201ENST00000525886 270 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 AC113192.3-201ENST00000529152 742 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 AP003385.6-201ENST00000531603 374 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 MIR3605-201ENST00000583214 100 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 AL161756.2-201ENST00000604597 246 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 AC004775.1-201ENST00000607389 753 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 AC068831.7-201ENST00000616954 363 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 STMN1P1-201ENST00000617809 440 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 AL356118.1-201ENST00000635272 1078 ntBASIC2.59□□□□□ -1.99
UBQLN4Q9NRR5 ZNF90P1-201ENST00000480493 1951 ntBASIC2.59□□□□□ -2
UBQLN4Q9NRR5 GABRG2-229ENST00000641017 3628 ntBASIC2.59□□□□□ -2
UBQLN4Q9NRR5 AL645568.2-201ENST00000432815 1337 ntBASIC2.59□□□□□ -2
UBQLN4Q9NRR5 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.59□□□□□ -2
UBQLN4Q9NRR5 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.59□□□□□ -2
UBQLN4Q9NRR5 AP002907.1-201ENST00000606361 1430 ntBASIC2.59□□□□□ -2
UBQLN4Q9NRR5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 ZNF734P-201ENST00000419494 1534 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 RNU6-1226P-201ENST00000384317 107 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 MIR181A2-201ENST00000384863 110 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 SFR1P1-201ENST00000403720 688 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 SNORD88.1-201ENST00000408684 91 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 RAD23BP2-201ENST00000416003 1207 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 RPL7P10-201ENST00000417407 739 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 HSPE1P1-201ENST00000421494 318 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 RPS26P56-201ENST00000444468 240 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 RSL24D1P2-201ENST00000445584 366 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 DNAJC19P8-201ENST00000452887 259 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 snoU13.3-201ENST00000459441 104 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 AC010301.1-201ENST00000473936 355 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 GMPSP1-201ENST00000514075 579 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 AC083923.1-201ENST00000523708 376 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 ZNF861P-201ENST00000588126 639 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 AL669831.4-202ENST00000590817 238 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 AC135178.6-201ENST00000605314 398 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 AC008962.1-201ENST00000605729 304 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 AC013468.1-201ENST00000608680 598 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms