Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 AC090132.1-201ENST00000524071 1480 ntBASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 U3.40-201ENST00000408706 208 ntBASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 RN7SKP39-201ENST00000410773 322 ntBASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 RN7SL308P-201ENST00000464971 297 ntBASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 RN7SL647P-201ENST00000485429 300 ntBASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 AL591122.1-201ENST00000487348 492 ntBASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 RFPL4AP5-201ENST00000514977 504 ntBASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 AC025647.1-201ENST00000517879 253 ntBASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 AC013283.1-201ENST00000557282 492 ntBASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 U47924.1-201ENST00000606539 434 ntBASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 MIR6829-201ENST00000620375 67 ntBASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 MIR3674-201ENST00000636576 68 ntBASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 AC093535.2-201ENST00000624769 2326 ntBASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MS4A3Q96HJ5 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 DDX50P1-201ENST00000438163 2400 ntBASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 PPIAP24-201ENST00000328558 471 ntBASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 Y_RNA.244-201ENST00000364484 109 ntBASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 RPL21P17-201ENST00000397467 475 ntBASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 AC017078.1-201ENST00000416146 368 ntBASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 RPL31P13-201ENST00000484151 370 ntBASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 RNA5SP54-201ENST00000516951 92 ntBASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 FOLH1B-202ENST00000529567 2145 ntBASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 MIR6726-201ENST00000613751 61 ntBASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 RN7SL680P-201ENST00000620379 299 ntBASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 AC116096.1-201ENST00000566804 2314 ntBASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MS4A3Q96HJ5 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 RNU6-1205P-201ENST00000363625 106 ntBASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 RNU6-136P-201ENST00000384663 107 ntBASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 AL603914.1-201ENST00000401964 204 ntBASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 SNORA2C-201ENST00000408564 137 ntBASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms