Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TNNC1P63316 RNU1-35P-201ENST00000362782 153 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 RNU6-263P-201ENST00000363811 107 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TNNC1P63316 AL589655.1-201ENST00000405398 482 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.09□□□□□ -1.91
TNNC1P63316 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.09□□□□□ -1.91
TNNC1P63316 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.09□□□□□ -1.91
TNNC1P63316 HSPE1P1-201ENST00000421494 318 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 DUTP6-201ENST00000425573 462 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 AC073508.1-201ENST00000428866 656 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.09□□□□□ -1.91
TNNC1P63316 HSPE1P28-201ENST00000443139 211 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 RPL36AP33-201ENST00000450395 310 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.09□□□□□ -1.91
TNNC1P63316 NIPA2P5-201ENST00000452282 464 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.09□□□□□ -1.91
TNNC1P63316 HMGB1P25-201ENST00000468402 607 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TNNC1P63316 RPS3AP14-201ENST00000483907 780 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 GMPSP1-201ENST00000514075 579 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 AC104057.1-201ENST00000515547 497 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 RNU6-488P-201ENST00000515918 99 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 CIR1P1-201ENST00000524055 1133 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 AC007536.1-201ENST00000533382 349 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TNNC1P63316 AC092470.1-201ENST00000546187 132 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 AC093014.1-201ENST00000548926 724 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.09□□□□□ -1.91
TNNC1P63316 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.09□□□□□ -1.91
TNNC1P63316 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.09□□□□□ -1.91
TNNC1P63316 AC022509.4-201ENST00000621404 572 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 AL356118.1-201ENST00000635272 1078 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 AC103988.1-201ENST00000566382 2177 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 ASNSP3-201ENST00000451989 1306 ntBASIC3.09□□□□□ -1.91
TNNC1P63316 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
TNNC1P63316 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.08□□□□□ -1.92
TNNC1P63316 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNNC1P63316 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.08□□□□□ -1.92
TNNC1P63316 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TNNC1P63316 Y_RNA.493-201ENST00000384422 102 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 SAR1AP2-201ENST00000392696 594 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 SSXP10-201ENST00000402595 565 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 RNU6-1077P-201ENST00000410506 102 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 AC233728.2-201ENST00000425348 757 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 AC006548.1-201ENST00000427470 102 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 DPPA2P1-201ENST00000428060 556 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 FABP5P3-201ENST00000437960 408 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 MUPP-201ENST00000438111 566 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.08□□□□□ -1.92
TNNC1P63316 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.08□□□□□ -1.92
TNNC1P63316 snoU13.4-201ENST00000458916 104 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TNNC1P63316 AC015724.1-201ENST00000478577 156 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TNNC1P63316 DSTNP2-201ENST00000504533 515 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.08□□□□□ -1.92
TNNC1P63316 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TNNC1P63316 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.08□□□□□ -1.92
TNNC1P63316 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.08□□□□□ -1.92
TNNC1P63316 RNU6-711P-201ENST00000517255 106 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 AP000857.1-201ENST00000532151 543 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.08□□□□□ -1.92
TNNC1P63316 MTCO3P13-201ENST00000577757 781 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.08□□□□□ -1.92
TNNC1P63316 OR2BH1P-201ENST00000608850 864 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 AC090115.4-201ENST00000609970 188 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 AL590240.3-201ENST00000621416 943 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 AL109659.3-201ENST00000624985 950 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 AC092608.3-201ENST00000625017 386 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 CR381572.1-201ENST00000625098 102 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.08□□□□□ -1.92
TNNC1P63316 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.08□□□□□ -1.92
TNNC1P63316 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.08□□□□□ -1.92
TNNC1P63316 AL645568.2-201ENST00000432815 1337 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 AL355578.1-201ENST00000607405 1328 ntBASIC3.08□□□□□ -1.92
TNNC1P63316 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.08□□□□□ -1.92
TNNC1P63316 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TNNC1P63316 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.07□□□□□ -1.92
TNNC1P63316 RNU6-1226P-201ENST00000384317 107 ntBASIC3.07□□□□□ -1.92
TNNC1P63316 MIR181A2-201ENST00000384863 110 ntBASIC3.07□□□□□ -1.92
TNNC1P63316 RNU1-101P-201ENST00000391171 127 ntBASIC3.07□□□□□ -1.92
TNNC1P63316 RNU4-78P-201ENST00000410940 126 ntBASIC3.07□□□□□ -1.92
TNNC1P63316 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.07□□□□□ -1.92
TNNC1P63316 HSFY1P1-201ENST00000423928 1178 ntBASIC3.07□□□□□ -1.92
TNNC1P63316 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.07□□□□□ -1.92
TNNC1P63316 RABEPKP1-201ENST00000440529 1026 ntBASIC3.07□□□□□ -1.92
TNNC1P63316 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.07□□□□□ -1.92
TNNC1P63316 RPS27AP9-201ENST00000477681 438 ntBASIC3.07□□□□□ -1.92
TNNC1P63316 AC006483.1-201ENST00000487308 313 ntBASIC3.07□□□□□ -1.92
TNNC1P63316 DYNLL1P6-201ENST00000503440 264 ntBASIC3.07□□□□□ -1.92
TNNC1P63316 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.07□□□□□ -1.92
TNNC1P63316 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.07□□□□□ -1.92
TNNC1P63316 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.07□□□□□ -1.92
TNNC1P63316 AC105914.1-201ENST00000511798 226 ntBASIC3.07□□□□□ -1.92
TNNC1P63316 SCARNA13-201ENST00000516672 275 ntBASIC3.07□□□□□ -1.92
TNNC1P63316 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.07□□□□□ -1.92
TNNC1P63316 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms