Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 SLC31A1P1-201ENST00000451221 567 ntBASIC4.71□□□□□ -1.66
ATXN1P54253 RNA5SP103-201ENST00000459503 118 ntBASIC4.71□□□□□ -1.66
ATXN1P54253 AC087879.1-201ENST00000474343 374 ntBASIC4.71□□□□□ -1.66
ATXN1P54253 AP000893.1-201ENST00000474462 794 ntBASIC4.71□□□□□ -1.66
ATXN1P54253 AC090013.1-201ENST00000485147 480 ntBASIC4.71□□□□□ -1.66
ATXN1P54253 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATXN1P54253 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.71□□□□□ -1.66
ATXN1P54253 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.71□□□□□ -1.66
ATXN1P54253 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATXN1P54253 PSMB7P1-201ENST00000556349 514 ntBASIC4.71□□□□□ -1.66
ATXN1P54253 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.71□□□□□ -1.66
ATXN1P54253 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.71□□□□□ -1.66
ATXN1P54253 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATXN1P54253 AC069304.2-201ENST00000605154 435 ntBASIC4.71□□□□□ -1.66
ATXN1P54253 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.71□□□□□ -1.66
ATXN1P54253 OR6R2P-201ENST00000609216 300 ntBASIC4.71□□□□□ -1.66
ATXN1P54253 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.71□□□□□ -1.66
ATXN1P54253 AC025048.6-202ENST00000627667 438 ntBASIC4.71□□□□□ -1.66
ATXN1P54253 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ATXN1P54253 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATXN1P54253 AC087190.4-201ENST00000574616 8334 ntBASIC4.71□□□□□ -1.66
ATXN1P54253 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATXN1P54253 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.71□□□□□ -1.66
ATXN1P54253 AP002907.1-201ENST00000606361 1430 ntBASIC4.71□□□□□ -1.66
ATXN1P54253 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATXN1P54253 CPHL1P-201ENST00000461341 3407 ntBASIC4.71□□□□□ -1.66
ATXN1P54253 AP001642.1-201ENST00000624727 2117 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATXN1P54253 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ATXN1P54253 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATXN1P54253 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.7□□□□□ -1.66
ATXN1P54253 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATXN1P54253 SNORA71.3-201ENST00000362582 128 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 Y_RNA.38-201ENST00000362617 102 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.7□□□□□ -1.66
ATXN1P54253 FAT1P1-201ENST00000406588 507 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 RNA5SP317-201ENST00000410176 116 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 RNU6-628P-201ENST00000410675 107 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 RNA5SP311-201ENST00000411290 116 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 AC007899.1-201ENST00000412776 775 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 SNRPFP1-201ENST00000414761 252 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 UBTFL3-201ENST00000418934 1024 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.7□□□□□ -1.66
ATXN1P54253 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.7□□□□□ -1.66
ATXN1P54253 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.7□□□□□ -1.66
ATXN1P54253 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.7□□□□□ -1.66
ATXN1P54253 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.7□□□□□ -1.66
ATXN1P54253 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 RPL23AP43-201ENST00000446445 471 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATXN1P54253 FTH1P25-201ENST00000447665 469 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 ST13P20-201ENST00000447996 1065 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATXN1P54253 SUMO2P2-201ENST00000456482 255 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.7□□□□□ -1.66
ATXN1P54253 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.7□□□□□ -1.66
ATXN1P54253 RPL30P9-201ENST00000465586 330 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 AP000852.1-201ENST00000472460 573 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 AC092989.1-201ENST00000481235 277 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 AC013828.1-201ENST00000481845 158 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.7□□□□□ -1.66
ATXN1P54253 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.7□□□□□ -1.66
ATXN1P54253 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.7□□□□□ -1.66
ATXN1P54253 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATXN1P54253 RN7SKP46-201ENST00000515942 234 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 RNU6-1045P-201ENST00000516321 107 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 RNA5SP315-201ENST00000516340 116 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 RNA5SP312-201ENST00000517068 116 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.7□□□□□ -1.66
ATXN1P54253 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.7□□□□□ -1.66
ATXN1P54253 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.7□□□□□ -1.66
ATXN1P54253 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.7□□□□□ -1.66
ATXN1P54253 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.7□□□□□ -1.66
ATXN1P54253 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.7□□□□□ -1.66
ATXN1P54253 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.7□□□□□ -1.66
ATXN1P54253 MIR4637-201ENST00000582405 84 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 AL596327.1-201ENST00000603629 213 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 AC090948.1-201ENST00000607464 549 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.7□□□□□ -1.66
ATXN1P54253 AC091953.5-201ENST00000622919 233 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 AC112487.2-201ENST00000637950 304 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATXN1P54253 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.7□□□□□ -1.66
ATXN1P54253 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATXN1P54253 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
ATXN1P54253 AC139769.1-204ENST00000472297 1931 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ATXN1P54253 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.7□□□□□ -1.66
ATXN1P54253 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATXN1P54253 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.69□□□□□ -1.66
ATXN1P54253 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ATXN1P54253 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.69□□□□□ -1.66
ATXN1P54253 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATXN1P54253 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.69□□□□□ -1.66
ATXN1P54253 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ATXN1P54253 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ATXN1P54253 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ATXN1P54253 PABPC1P9-201ENST00000426076 1612 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms