Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CBX3P6-201ENST00000430257 527 ntBASIC5.64□□□□□ -1.51
USP11P51784 RPS24P8-201ENST00000431490 402 ntBASIC5.64□□□□□ -1.51
USP11P51784 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.64□□□□□ -1.51
USP11P51784 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.64□□□□□ -1.51
USP11P51784 GMFBP1-201ENST00000467831 427 ntBASIC5.64□□□□□ -1.51
USP11P51784 AC006512.1-201ENST00000468816 291 ntBASIC5.64□□□□□ -1.51
USP11P51784 AP001025.2-201ENST00000490908 477 ntBASIC5.64□□□□□ -1.51
USP11P51784 AC106872.2-201ENST00000494303 480 ntBASIC5.64□□□□□ -1.51
USP11P51784 RN7SL591P-201ENST00000496150 292 ntBASIC5.64□□□□□ -1.51
USP11P51784 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.64□□□□□ -1.51
USP11P51784 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.64□□□□□ -1.51
USP11P51784 MTCO2P24-201ENST00000515611 426 ntBASIC5.64□□□□□ -1.51
USP11P51784 RNA5SP337-201ENST00000517007 109 ntBASIC5.64□□□□□ -1.51
USP11P51784 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.64□□□□□ -1.51
USP11P51784 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.64□□□□□ -1.51
USP11P51784 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.64□□□□□ -1.51
USP11P51784 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.64□□□□□ -1.51
USP11P51784 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.64□□□□□ -1.51
USP11P51784 AC017100.2-201ENST00000584628 355 ntBASIC5.64□□□□□ -1.51
USP11P51784 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
USP11P51784 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.64□□□□□ -1.51
USP11P51784 AC245389.1-201ENST00000605141 529 ntBASIC5.64□□□□□ -1.51
USP11P51784 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
USP11P51784 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
USP11P51784 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
USP11P51784 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP11P51784 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
USP11P51784 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP11P51784 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USP11P51784 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.63□□□□□ -1.51
USP11P51784 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP11P51784 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
USP11P51784 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP11P51784 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP11P51784 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.63□□□□□ -1.51
USP11P51784 RNY1P12-201ENST00000364251 105 ntBASIC5.63□□□□□ -1.51
USP11P51784 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.63□□□□□ -1.51
USP11P51784 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP11P51784 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.63□□□□□ -1.51
USP11P51784 SNORA51.8-201ENST00000384234 132 ntBASIC5.63□□□□□ -1.51
USP11P51784 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP11P51784 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
USP11P51784 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.63□□□□□ -1.51
USP11P51784 RPL36AP36-201ENST00000418616 301 ntBASIC5.63□□□□□ -1.51
USP11P51784 AC048351.1-201ENST00000420064 602 ntBASIC5.63□□□□□ -1.51
USP11P51784 RPL34P6-201ENST00000432390 345 ntBASIC5.63□□□□□ -1.51
USP11P51784 AL731563.1-201ENST00000442202 214 ntBASIC5.63□□□□□ -1.51
USP11P51784 HSPE1P28-201ENST00000443139 211 ntBASIC5.63□□□□□ -1.51
USP11P51784 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.63□□□□□ -1.51
USP11P51784 DDX3P2-201ENST00000446138 111 ntBASIC5.63□□□□□ -1.51
USP11P51784 HMGB3P22-202ENST00000451823 572 ntBASIC5.63□□□□□ -1.51
USP11P51784 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.63□□□□□ -1.51
USP11P51784 Y_RNA.635-201ENST00000459041 101 ntBASIC5.63□□□□□ -1.51
USP11P51784 AP000942.1-201ENST00000463969 747 ntBASIC5.63□□□□□ -1.51
USP11P51784 AC034222.1-201ENST00000494052 532 ntBASIC5.63□□□□□ -1.51
USP11P51784 AC090453.1-201ENST00000495560 436 ntBASIC5.63□□□□□ -1.51
USP11P51784 MTCO1P29-201ENST00000496868 288 ntBASIC5.63□□□□□ -1.51
USP11P51784 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.63□□□□□ -1.51
USP11P51784 AC004062.1-201ENST00000509926 645 ntBASIC5.63□□□□□ -1.51
USP11P51784 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.63□□□□□ -1.51
USP11P51784 AC105031.1-201ENST00000518550 476 ntBASIC5.63□□□□□ -1.51
USP11P51784 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.63□□□□□ -1.51
USP11P51784 RPL7P20-201ENST00000520308 745 ntBASIC5.63□□□□□ -1.51
USP11P51784 RPL23AP53-201ENST00000521854 457 ntBASIC5.63□□□□□ -1.51
USP11P51784 OR5B10P-201ENST00000532869 642 ntBASIC5.63□□□□□ -1.51
USP11P51784 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USP11P51784 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.63□□□□□ -1.51
USP11P51784 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.63□□□□□ -1.51
USP11P51784 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.63□□□□□ -1.51
USP11P51784 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.63□□□□□ -1.51
USP11P51784 AC104687.2-201ENST00000604442 342 ntBASIC5.63□□□□□ -1.51
USP11P51784 AC087783.2-201ENST00000605070 562 ntBASIC5.63□□□□□ -1.51
USP11P51784 AC004908.2-201ENST00000609090 574 ntBASIC5.63□□□□□ -1.51
USP11P51784 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.63□□□□□ -1.51
USP11P51784 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.63□□□□□ -1.51
USP11P51784 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.63□□□□□ -1.51
USP11P51784 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.63□□□□□ -1.51
USP11P51784 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.63□□□□□ -1.51
USP11P51784 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.63□□□□□ -1.51
USP11P51784 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USP11P51784 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP11P51784 AP004289.2-201ENST00000444413 1457 ntBASIC5.63□□□□□ -1.51
USP11P51784 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.63□□□□□ -1.51
USP11P51784 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP11P51784 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.63□□□□□ -1.51
USP11P51784 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.63□□□□□ -1.51
USP11P51784 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP11P51784 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP11P51784 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.62□□□□□ -1.51
USP11P51784 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.62□□□□□ -1.51
USP11P51784 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP11P51784 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
USP11P51784 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP11P51784 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.62□□□□□ -1.51
USP11P51784 SNORA73.1-201ENST00000363107 205 ntBASIC5.62□□□□□ -1.51
USP11P51784 Y_RNA.100-201ENST00000363141 102 ntBASIC5.62□□□□□ -1.51
USP11P51784 Y_RNA.187-201ENST00000363918 113 ntBASIC5.62□□□□□ -1.51
USP11P51784 CISD1P1-201ENST00000393907 327 ntBASIC5.62□□□□□ -1.51
USP11P51784 AL031679.1-201ENST00000400616 525 ntBASIC5.62□□□□□ -1.51
USP11P51784 MTCYBP4-201ENST00000401524 249 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms